Nuclear phylogenomics of angiosperms and insights into their relationships and evolution

G Zhang, H Ma - Journal of Integrative Plant Biology, 2024 - Wiley Online Library
Angiosperms (flowering plants) are by far the most diverse land plant group with over
300,000 species. The sudden appearance of diverse angiosperms in the fossil record was …

Phylogenomic conflict analyses in the apple genus Malus sl reveal widespread hybridization and allopolyploidy driving diversification, with insights into the complex …

BB Liu, C Ren, M Kwak, RGJ Hodel… - Journal of Integrative …, 2022 - Wiley Online Library
Phylogenomic evidence from an increasing number of studies has demonstrated that
different data sets and analytical approaches often reconstruct strongly supported but …

Capturing single‐copy nuclear genes, organellar genomes, and nuclear ribosomal DNA from deep genome skimming data for plant phylogenetics: A case study in …

BB Liu, ZY Ma, C Ren, RGJ Hodel… - … of Systematics and …, 2021 - Wiley Online Library
With the decreasing cost and availability of many newly developed bioinformatics pipelines,
next‐generation sequencing (NGS) has revolutionized plant systematics in recent years …

The classification of the Compositae: A tribute to Vicki Ann Funk (1947–2019)

A Susanna, BG Baldwin, RJ Bayer, JM Bonifacino… - Taxon, 2020 - Wiley Online Library
The classification of the family Compositae (Asteraceae) has been much improved in the last
decades by the application of molecular methods culminating in the recompilation published …

[HTML][HTML] Taxonomy, evolution, and biogeography of the Rhodniini tribe (Hemiptera: Reduviidae)

C Hernández, J Aristeu da Rosa, GA Vallejo, F Guhl… - Diversity, 2020 - mdpi.com
The Triatominae subfamily includes 151 extant and three fossil species. Several species can
transmit the protozoan parasite Trypanosoma cruzi, the causative agent of Chagas disease …

Plastid phylogenomics of the tribe potentilleae (Rosaceae)

QQ Li, ZP Zhang, J Wen, Y Yu - Molecular Phylogenetics and Evolution, 2024 - Elsevier
The tribe Potentilleae comprises approximately 1700 species in 13 genera, making it one of
the largest of the 16 tribes in Rosaceae. Our understanding of the composition and …

Phylogenomic relationships and character evolution of the grape family (Vitaceae)

ZY Ma, ZL Nie, C Ren, XQ Liu, EA Zimmer… - Molecular Phylogenetics …, 2021 - Elsevier
The grape family consists of 16 genera and ca. 950 species. It is best known for the
economically important fruit crop–the grape Vitis vinifera. The deep phylogenetic …

Phylogenetic lineages and the role of hybridization as driving force of evolution in grass supertribe Poodae

N Tkach, J Schneider, E Döring, A Wölk, A Hochbach… - Taxon, 2020 - Wiley Online Library
To investigate the evolutionary diversification and morphological evolution of grass
supertribe Poodae (subfam. Pooideae, Poaceae) we conducted a comprehensive molecular …

A prickly puzzle: Generic delimitations in the CarduusCirsium group (Compositae: Cardueae: Carduinae)

J Ackerfield, A Susanna, V Funk, D Kelch, DS Park… - Taxon, 2020 - Wiley Online Library
Generic delimitations within the cosmopolitan Carduus‐Cirsium group (ie,“thistles”) have a
long history of taxonomic confusion and debate. We present the most comprehensive …

Lineage‐specific vs. universal: A comparison of the Compositae1061 and Angiosperms353 enrichment panels in the sunflower family

CM Siniscalchi, O Hidalgo, L Palazzesi… - Applications in Plant …, 2021 - Wiley Online Library
Premise Phylogenetic studies in the Compositae are challenging due to the sheer size of the
family and the challenges they pose for molecular tools, ranging from the genomic impact of …