The extensive use of phthalic acid esters (PAEs) has led to their widespread distribution
across various environments. As PAEs pose significant threats to human health, it is urgent …

The application of microbial co-cultures is now recognized in the fields of biotechnology,
ecology, and medicine. Understanding the biological interactions that govern the …

Highlights•Analysis and designing of microbiomes have become a new paradigm in
microbiology.•Understanding and rational engineering of microbiomes require model-based …

Computational modeling of microbial communities using GEnome-scale Models (GEMs) of
metabolism is a new frontier in systems biology. Here, we discuss recent developments in …

Metabolic engineering involves the manipulation of microbes to produce desirable
compounds through genetic engineering or synthetic biology approaches. Metabolomics …

Microbes propagate and thrive in complex communities, and there are many benefits to
studying and engineering microbial communities instead of single strains. Microbial …

The availability of multi-omics data sets and genome-scale metabolic models for various
organisms provide a platform for modeling and analyzing genotype-to-phenotype …

Soil is an extremely complex and dynamic matrix, in part, due to the wide diversity of
organisms living within it. Soil organic matter (SOM) is the fundamental substrate on which …

The human gut is a complex ecosystem consisting of hundreds of microbial species
interacting with each other and with the human host. Mathematical models of the gut …

Metabolic activities of the microbial population are important to maintain the balance of
almost all the ecosystems on earth. In the human gut environment, these microbial …