Rice functional genomics: decades' efforts and roads ahead

R Chen, Y Deng, Y Ding, J Guo, J Qiu, B Wang… - Science China Life …, 2022 - Springer
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …

Bulk segregation analysis in the NGS era: a review of its teenage years

Z Li, Y Xu - The Plant Journal, 2022 - Wiley Online Library
Bulk segregation analysis (BSA) utilizes a strategy of pooling individuals with extreme
phenotypes to conduct economical and rapidly linked marker screening or quantitative trait …

Hydrogen peroxide sensor HPCA1 is an LRR receptor kinase in Arabidopsis

F Wu, Y Chi, Z Jiang, Y Xu, L Xie, F Huang, DI Wan… - Nature, 2020 - nature.com
Abstract Hydrogen peroxide (H2O2) is a major reactive oxygen species in unicellular and
multicellular organisms, and is produced extracellularly in response to external stresses and …

Einkorn genomics sheds light on history of the oldest domesticated wheat

HI Ahmed, M Heuberger, A Schoen, DH Koo… - Nature, 2023 - nature.com
Einkorn (Triticum monococcum) was the first domesticated wheat species, and was central
to the birth of agriculture and the Neolithic Revolution in the Fertile Crescent around 10,000 …

Genomic resources in plant breeding for sustainable agriculture

M Thudi, R Palakurthi, JC Schnable… - Journal of Plant …, 2021 - Elsevier
Climate change during the last 40 years has had a serious impact on agriculture and
threatens global food and nutritional security. From over half a million plant species, cereals …

Recent advances in carbon and nitrogen metabolism in C3 plants

M Baslam, T Mitsui, K Sueyoshi, T Ohyama - International Journal of …, 2020 - mdpi.com
C and N are the most important essential elements constituting organic compounds in
plants. The shoots and roots depend on each other by exchanging C and N through the …

QTL‐seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations

H Takagi, A Abe, K Yoshida, S Kosugi… - The Plant …, 2013 - Wiley Online Library
The majority of agronomically important crop traits are quantitative, meaning that they are
controlled by multiple genes each with a small effect (quantitative trait loci, QTL s). Mapping …

A molecular switch in sulfur metabolism to reduce arsenic and enrich selenium in rice grain

SK Sun, X Xu, Z Tang, Z Tang, XY Huang… - Nature …, 2021 - nature.com
Rice grains typically contain high levels of toxic arsenic but low levels of the essential
micronutrient selenium. Anthropogenic arsenic contamination of paddy soils exacerbates …

A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits

G Zhao, Q Lian, Z Zhang, Q Fu, Y He, S Ma… - Nature Genetics, 2019 - nature.com
Melon is an economically important fruit crop that has been cultivated for thousands of years;
however, the genetic basis and history of its domestication still remain largely unknown …

Engineering salinity tolerance in plants: progress and prospects

SH Wani, V Kumar, T Khare, R Guddimalli, M Parveda… - Planta, 2020 - Springer
Main conclusion There is a need to integrate conceptual framework based on the current
understanding of salt stress responses with different approaches for manipulating and …