Multi-omic data integration and analysis using systems genomics approaches: methods and applications in animal production, health and welfare
P Suravajhala, LJA Kogelman… - Genetics Selection …, 2016 - Springer
In the past years, there has been a remarkable development of high-throughput omics (HTO)
technologies such as genomics, epigenomics, transcriptomics, proteomics and …
technologies such as genomics, epigenomics, transcriptomics, proteomics and …
The application of omics in ruminant production: A review in the tropical and sub-tropical animal production context
The demand for animal products (eg dairy and beef) in tropical regions is expected to
increase in parallel with the public demand for sustainable practices, due to factors such as …
increase in parallel with the public demand for sustainable practices, due to factors such as …
Genetic architecture of quantitative traits in beef cattle revealed by genome wide association studies of imputed whole genome sequence variants: I: feed efficiency …
Background Genome wide association studies (GWAS) on residual feed intake (RFI) and its
component traits including daily dry matter intake (DMI), average daily gain (ADG), and …
component traits including daily dry matter intake (DMI), average daily gain (ADG), and …
RNA-Seq transcriptomics and pathway analyses reveal potential regulatory genes and molecular mechanisms in high-and low-residual feed intake in Nordic dairy …
Background The selective breeding of cattle with high-feed efficiencies (FE) is an important
goal of beef and dairy cattle producers. Global gene expression patterns in relevant tissues …
goal of beef and dairy cattle producers. Global gene expression patterns in relevant tissues …
Identification of gene networks for residual feed intake in Angus cattle using genomic prediction and RNA-seq
Improvement in feed conversion efficiency can improve the sustainability of beef cattle
production, but genomic selection for feed efficiency affects many underlying molecular …
production, but genomic selection for feed efficiency affects many underlying molecular …
Identification of a metabolomic signature associated with feed efficiency in beef cattle
FJ Novais, PRL Pires, PA Alexandre, RA Dromms… - BMC genomics, 2019 - Springer
Background Ruminants play a great role in sustainable livestock since they transform
pastures, silage, and crop residues into high-quality human food (ie milk and beef). Animals …
pastures, silage, and crop residues into high-quality human food (ie milk and beef). Animals …
A transcriptome multi-tissue analysis identifies biological pathways and genes associated with variations in feed efficiency of growing pigs
F Gondret, A Vincent, M Houée-Bigot, A Siegel… - BMC genomics, 2017 - Springer
Background Animal's efficiency in converting feed into lean gain is a critical issue for the
profitability of meat industries. This study aimed to describe shared and specific molecular …
profitability of meat industries. This study aimed to describe shared and specific molecular …
GWAS and eQTL analysis identifies a SNP associated with both residual feed intake and GFRA2 expression in beef cattle
MG Higgins, C Fitzsimons, MC McClure, C McKenna… - Scientific reports, 2018 - nature.com
Residual feed intake (RFI), a measure of feed efficiency, is an important economic and
environmental trait in beef production. Selection of low RFI (feed efficient) cattle could …
environmental trait in beef production. Selection of low RFI (feed efficient) cattle could …
Liver proteomics unravel the metabolic pathways related to feed efficiency in beef cattle
Improving nutrient utilization efficiency is essential for livestock, given the current scenario of
increasing demand for animal protein and sustainable resource use. In this context …
increasing demand for animal protein and sustainable resource use. In this context …
Gene expression differences in Longissimus muscle of Nelore steers genetically divergent for residual feed intake
Residual feed intake (RFI), a measure of feed efficiency (FE), is defined as the difference
between the observed and the predictable feed intake considering size and growth of the …
between the observed and the predictable feed intake considering size and growth of the …