[HTML][HTML] Mechanisms and functions of ATP-dependent chromatin-remodeling enzymes

GJ Narlikar, R Sundaramoorthy, T Owen-Hughes - Cell, 2013 - cell.com
Chromatin provides both a means to accommodate a large amount of genetic material in a
small space and a means to package the same genetic material in different chromatin states …

Recognition, signaling, and repair of DNA double-strand breaks produced by ionizing radiation in mammalian cells: the molecular choreography

LH Thompson - Mutation Research/Reviews in Mutation Research, 2012 - Elsevier
The faithful maintenance of chromosome continuity in human cells during DNA replication
and repair is critical for preventing the conversion of normal diploid cells to an oncogenic …

Nucleosome density shapes kilobase-scale regulation by a mammalian chromatin remodeler

NJ Abdulhay, LJ Hsieh, CP McNally… - Nature Structural & …, 2023 - nature.com
Nearly all essential nuclear processes act on DNA packaged into arrays of nucleosomes.
However, our understanding of how these processes (for example, DNA replication, RNA …

ATP-dependent nucleosome remodeling

PB Becker, W Hörz - Annual review of biochemistry, 2002 - annualreviews.org
▪ Abstract It has been a long-standing challenge to decipher the principles that enable cells
to both organize their genomes into compact chromatin and ensure that the genetic …

[HTML][HTML] The site-specific installation of methyl-lysine analogs into recombinant histones

MD Simon, F Chu, LR Racki, CC de la Cruz… - Cell, 2007 - cell.com
Histone lysine residues can be mono-, di-, or trimethylated. These posttranslational
modifications regulate the affinity of effector proteins and may also impact chromatin …

Lessons from the Genome Sequence of Neurospora crassa: Tracing the Path from Genomic Blueprint to Multicellular Organism

KA Borkovich, LA Alex, O Yarden… - Microbiology and …, 2004 - Am Soc Microbiol
We present an analysis of over 1,100 of the∼ 10,000 predicted proteins encoded by the
genome sequence of the filamentous fungus Neurospora crassa. Seven major areas of …

Basic concepts of epigenetics: impact of environmental signals on gene expression

EA Mazzio, KFA Soliman - Epigenetics, 2012 - Taylor & Francis
Through epigenetic modifications, specific long-term phenotypic consequences can arise
from environmental influence on slowly evolving genomic DNA. Heritable epigenetic …

The PHD finger, a nuclear protein-interaction domain

M Bienz - Trends in biochemical sciences, 2006 - cell.com
The PHD finger is a common structural motif found in all eukaryotic genomes. It is a Zn 2+-
binding domain and its closest structural relative is the RING domain. Many RING fingers …

Understanding the words of chromatin regulation

JI Wu, J Lessard, GR Crabtree - Cell, 2009 - cell.com
Recent studies indicate that chromatin regulatory complexes produce biological specificity in
the way that letters produce meanings by combinations into words. Combinatorial assembly …

An ACF1–ISWI chromatin-remodeling complex is required for DNA replication through heterochromatin

N Collins, RA Poot, I Kukimoto, C García-Jiménez… - Nature …, 2002 - nature.com
The mechanism by which the eukaryotic DNA-replication machinery penetrates condensed
chromatin structures to replicate the underlying DNA is poorly understood. Here we provide …