Ten principles of heterochromatin formation and function

RC Allshire, HD Madhani - Nature reviews Molecular cell biology, 2018 - nature.com
Heterochromatin is a key architectural feature of eukaryotic chromosomes, which endows
particular genomic domains with specific functional properties. The capacity of …

The RNAs of RNA-directed DNA methylation

JM Wendte, CS Pikaard - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
RNA-directed chromatin modification that includes cytosine methylation silences
transposable elements in both plants and mammals, contributing to genome defense and …

Enzymatic reactions of AGO4 in RNA-directed DNA methylation: siRNA duplex loading, passenger strand elimination, target RNA slicing, and sliced target retention

F Wang, HY Huang, J Huang, J Singh… - Genes & …, 2023 - genesdev.cshlp.org
RNA-directed DNA methylation in plants is guided by 24-nt siRNAs generated in parallel
with 23-nt RNAs of unknown function. We show that 23-nt RNAs function as passenger …

A matter of time: small RNAs regulate the duration of epigenetic inheritance

L Houri-Zeevi, O Rechavi - Trends in Genetics, 2017 - cell.com
Small RNAs are increasingly emerging as transgenerational carriers of epigenetic
information in Caenorhabditis elegans and in other organisms. Recent studies have …

Long non-coding RNA produced by RNA polymerase V determines boundaries of heterochromatin

G Böhmdorfer, S Sethuraman, MJ Rowley, M Krzyszton… - Elife, 2016 - elifesciences.org
RNA-mediated transcriptional gene silencing is a conserved process where small RNAs
target transposons and other sequences for repression by establishing chromatin …

miRNA-mediated RNA activation in mammalian cells

R Ramchandran, P Chaluvally-Raghavan - RNA activation, 2017 - Springer
MicroRNA (miRNA or miR) is a small noncoding RNA molecule~ 22 nucleotides in size,
which is found in plants, animals, and some viruses. miRNAs are thought to primarily down …

New insight into inter-kingdom communication: horizontal transfer of mobile small RNAs

G Zhou, Y Zhou, X Chen - Frontiers in microbiology, 2017 - frontiersin.org
Small RNAs (sRNAs), including small interfering RNAs (siRNAs) and microRNAs (miRNAs),
are conventionally regarded as critical molecular regulators of various intracellular …

The multiplicity of Argonaute complexes in mammalian cells

M Mauro, M Berretta, G Palermo, V Cavalieri… - … of Pharmacology and …, 2023 - ASPET
Argonautes (AGOs) are a highly conserved family of proteins found in most eukaryotes and
involved in mechanisms of gene regulation, both at the transcriptional and post …

The histone acetyltransferase Mst2 protects active chromatin from epigenetic silencing by acetylating the ubiquitin ligase Brl1

V Flury, PR Georgescu, V Iesmantavicius, Y Shimada… - Molecular cell, 2017 - cell.com
Faithful propagation of functionally distinct chromatin states is crucial for maintaining cellular
identity, and its breakdown can lead to diseases such as cancer. Whereas mechanisms that …

Satb2 ablation impairs hippocampus-based long-term spatial memory and short-term working memory and immediate early genes (IEGs)-mediated hippocampal …

Y Li, QL You, SR Zhang, WY Huang, WJ Zou… - Molecular …, 2017 - Springer
Special AT-rich sequence-binding protein 2 (Satb2) is a protein binding to the matrix
attachment regions of DNA and important for gene regulation. Patients with SATB2 mutation …