Environmental DNA metabarcoding: A novel method for biodiversity monitoring of marine fish communities

M Miya - Annual Review of Marine Science, 2022 - annualreviews.org
Environmental DNA (eDNA) is genetic material that has been shed from macroorganisms. It
has received increased attention as an indirect marker for biodiversity monitoring. This …

[HTML][HTML] MiFish metabarcoding: a high-throughput approach for simultaneous detection of multiple fish species from environmental DNA and other samples

M Miya, RO Gotoh, T Sado - Fisheries Science, 2020 - Springer
We reviewed the current methodology and practices of the DNA metabarcoding approach
using a universal PCR primer pair MiFish, which co-amplifies a short fragment of fish DNA …

Fishing for fish environmental DNA: Ecological applications, methodological considerations, surveying designs, and ways forward

M Yao, S Zhang, Q Lu, X Chen, SY Zhang… - Molecular …, 2022 - Wiley Online Library
Vast global declines of freshwater and marine fish diversity and population abundance pose
serious threats to both ecosystem sustainability and human livelihoods. Environmental DNA …

[HTML][HTML] Personal care and cosmetic products as a potential source of environmental contamination by microplastics in a densely populated Asian city

SM Bashir, S Kimiko, CW Mak, JKH Fang… - Frontiers in Marine …, 2021 - frontiersin.org
The prevalence of microplastics in the environment has become a major global conservation
issue. One primary source of environmental microplastics is personal care and cosmetic …

[HTML][HTML] Calibrating environmental DNA metabarcoding to conventional surveys for measuring fish species richness

ME McElroy, TL Dressler, GC Titcomb… - Frontiers in Ecology …, 2020 - frontiersin.org
The ability to properly identify species present in a landscape is foundational to ecology and
essential for natural resource management and conservation. However, many species are …

[HTML][HTML] Comparing eDNA metabarcoding primers for assessing fish communities in a biodiverse estuary

G Kumar, AM Reaume, E Farrell, MR Gaither - PloS one, 2022 - journals.plos.org
Metabarcoding of environmental DNA is increasingly used for biodiversity assessments in
aquatic communities. The efficiency and outcome of these efforts are dependent upon either …

Marine biomonitoring with eDNA: Can metabarcoding of water samples cut it as a tool for surveying benthic communities?

A Antich, C Palacín, E Cebrian, R Golo… - Molecular …, 2021 - Wiley Online Library
In the marine realm, biomonitoring using environmental DNA (eDNA) of benthic
communities requires destructive direct sampling or the setting‐up of settlement structures …

[HTML][HTML] Environmental DNA methods for ecological monitoring and biodiversity assessment in estuaries

RP Nagarajan, M Bedwell, AE Holmes, T Sanches… - Estuaries and …, 2022 - Springer
Environmental DNA (eDNA) detection methods can complement traditional biomonitoring to
yield new ecological insights in aquatic systems. However, the conceptual and …

[HTML][HTML] Congruency between two traditional and eDNA-based sampling methods in characterising taxonomic and trait-based structure of fish communities and …

I Czeglédi, P Sály, A Specziár, B Preiszner… - Ecological …, 2021 - Elsevier
Recent developments in environmental DNA (eDNA) metabarcoding suggest that eDNA-
based representation of ecological communities can be a promising tool in both …

Environmental DNA metabarcoding for biodiversity monitoring of a highly diverse tropical fish community in a coral reef lagoon: Estimation of species richness and …

S Oka, H Doi, K Miyamoto, N Hanahara… - Environmental …, 2021 - Wiley Online Library
An environmental DNA (eDNA) metabarcoding approach has been widely used for
biodiversity monitoring of fishes, although it has rarely been applied to tropical and …