A simple new approach to variable selection in regression, with application to genetic fine mapping

G Wang, A Sarkar, P Carbonetto… - Journal of the Royal …, 2020 - academic.oup.com
We introduce a simple new approach to variable selection in linear regression, with a
particular focus on quantifying uncertainty in which variables should be selected. The …

[HTML][HTML] Multi-resolution localization of causal variants across the genome

M Sesia, E Katsevich, S Bates, E Candès… - Nature …, 2020 - nature.com
In the statistical analysis of genome-wide association data, it is challenging to precisely
localize the variants that affect complex traits, due to linkage disequilibrium, and to maximize …

Causal inference in genetic trio studies

S Bates, M Sesia, C Sabatti… - Proceedings of the …, 2020 - National Acad Sciences
We introduce a method to draw causal inferences—inferences immune to all possible
confounding—from genetic data that include parents and offspring. Causal conclusions are …

Group inference in high dimensions with applications to hierarchical testing

Z Guo, C Renaux, P Bühlmann… - Electronic Journal of …, 2021 - projecteuclid.org
High-dimensional group inference is an essential part of statistical methods for analysing
complex data sets, including hierarchical testing, tests of interaction, detection of …

Multicarving for high-dimensional post-selection inference

C Schultheiss, C Renaux, P Bühlmann - 2021 - projecteuclid.org
We consider post-selection inference for high-dimensional (generalized) linear models.
Data carving from Fithian, Sun and Taylor [10] is a promising technique to perform this task …

Catch me if you can: signal localization with knockoff e-values

P Gablenz, C Sabatti - Journal of the Royal Statistical Society …, 2024 - academic.oup.com
We consider problems where many, somewhat redundant, hypotheses are tested and we
are interested in reporting the most precise rejections, with false discovery rate (FDR) …

[HTML][HTML] Boosting heritability: estimating the genetic component of phenotypic variation with multiple sample splitting

TT Mai, P Turner, J Corander - BMC bioinformatics, 2021 - Springer
Background Heritability is a central measure in genetics quantifying how much of the
variability observed in a trait is attributable to genetic differences. Existing methods for …

[HTML][HTML] A three-stage approach to identify biomarker signatures for cancer genetic data with survival endpoints

X Wu, C Chen, Z Li, L Zhang, VM Chinchilli… - Statistical Methods & …, 2024 - Springer
The identification of prognostic and predictive biomarker signatures is crucial for drug
development and providing personalized treatment to cancer patients. However, the …

Identifying Important Predictors in Large Data Bases− Multiple Testing and Model Selection

M Bogdan, F Frommlet - Handbook of multiple comparisons, 2021 - taylorfrancis.com
We discuss the problem of supervised statistical learning in large data sets where the
number of explanatory variables may exceed the number of observations. In this situation …

Controlled discovery and localization of signals via Bayesian linear programming

A Spector, L Janson - Journal of the American Statistical …, 2024 - Taylor & Francis
Scientists often must simultaneously localize and discover signals. For instance, in genetic
fine-mapping, high correlations between nearby genetic variants make it hard to identify the …