Concepts of artificial intelligence for computer-assisted drug discovery

X Yang, Y Wang, R Byrne, G Schneider… - Chemical …, 2019 - ACS Publications
Artificial intelligence (AI), and, in particular, deep learning as a subcategory of AI, provides
opportunities for the discovery and development of innovative drugs. Various machine …

Using chemical structure information to develop predictive models for in vitro toxicokinetic parameters to inform high-throughput risk-assessment

P Pradeep, G Patlewicz, R Pearce, J Wambaugh… - Computational …, 2020 - Elsevier
The toxicokinetic (TK) parameters fraction of the chemical unbound to plasma proteins and
metabolic clearance are critical for relating exposure and internal dose when building in …

IDL-PPBopt: a strategy for prediction and optimization of human plasma protein binding of compounds via an interpretable deep learning method

C Lou, H Yang, J Wang, M Huang, W Li… - Journal of Chemical …, 2022 - ACS Publications
The prediction and optimization of pharmacokinetic properties are essential in lead
optimization. Traditional strategies mainly depend on the empirical chemical rules from …

Machine learning prediction of hydrocarbon mixture lower flammability limits using quantitative structure‐property relationship models

Z Jiao, S Yuan, Z Zhang, Q Wang - Process Safety Progress, 2020 - Wiley Online Library
Lower flammability limit (LFL) of hydrocarbon mixture is a critical property for fire and
explosion hazards. In this study, by using experimental LFL data of hydrocarbon mixture …

Calculated hydration free energies become less accurate with increases in molecular weight

SM Ivanov - PLoS One, 2024 - journals.plos.org
In order for computer-aided drug design to fulfil its long held promise of delivering new
medicines faster and cheaper, extensive development and validation work must be done …

Evaluation of Anti-wear Properties of Different Vegetable Oils Based on QSPR Model

J Liu, R Zhang, S Yang, T Liu, C Yi, Y Zhang, D Jia - Tribology Letters, 2023 - Springer
Vegetable oils can be used as an alternative to traditional mineral-based lubricants because
of their biodegradation and good lubrication. Considering that vegetable oils are mixtures …

QSAR development for plasma protein binding: influence of the ionization state

C Toma, D Gadaleta, A Roncaglioni, A Toropov… - Pharmaceutical …, 2019 - Springer
Purpose This study explored several strategies to improve the performance of literature
QSAR models for plasma protein binding (PPB), such as a suitable endpoint transformation …

[HTML][HTML] The state-of-the-art machine learning model for Plasma Protein Binding Prediction: computational modeling with OCHEM and experimental validation

Z Han, Z Xia, J Xia, IV Tetko, S Wu - European Journal of Pharmaceutical …, 2025 - Elsevier
Plasma protein binding (PPB) is closely related to pharmacokinetics, pharmacodynamics
and drug toxicity. Existing models for predicting PPB often suffer from low prediction …

QSAR modeling for predicting mutagenic toxicity of diverse chemicals for regulatory purposes

N Basant, S Gupta - Environmental Science and Pollution Research, 2017 - Springer
The safety assessment process of chemicals requires information on their mutagenic
potential. The experimental determination of mutagenicity of a large number of chemicals is …

Modeling the pH and temperature dependence of aqueousphase hydroxyl radical reaction rate constants of organic micropollutants using QSPR approach

S Gupta, N Basant - Environmental Science and Pollution Research, 2017 - Springer
Designing of advanced oxidation process (AOP) requires knowledge of the aqueous phase
hydroxyl radical (● OH) reactions rate constants (k OH), which are strictly dependent upon …