The expanding world of tRNA modifications and their disease relevance

T Suzuki - Nature Reviews Molecular Cell Biology, 2021 - nature.com
Transfer RNA (tRNA) is an adapter molecule that links a specific codon in mRNA with its
corresponding amino acid during protein synthesis. tRNAs are enzymatically modified post …

The tRNA identity landscape for aminoacylation and beyond

R Giegé, G Eriani - Nucleic Acids Research, 2023 - academic.oup.com
Abstract tRNAs are key partners in ribosome-dependent protein synthesis. This process is
highly dependent on the fidelity of tRNA aminoacylation by aminoacyl-tRNA synthetases …

The life and times of a tRNA

EM Phizicky, AK Hopper - RNA, 2023 - rnajournal.cshlp.org
The study of eukaryotic tRNA processing has given rise to an explosion of new information
and insights in the last several years. We now have unprecedented knowledge of each step …

Naturally occurring modified ribonucleosides

PJ McCown, A Ruszkowska, CN Kunkler… - Wiley …, 2020 - Wiley Online Library
The chemical identity of RNA molecules beyond the four standard ribonucleosides has
fascinated scientists since pseudouridine was characterized as the “fifth” ribonucleotide in …

An integrated, structure-and energy-based view of the genetic code

H Grosjean, E Westhof - Nucleic acids research, 2016 - academic.oup.com
The principles of mRNA decoding are conserved among all extant life forms. We present an
integrative view of all the interaction networks between mRNA, tRNA and rRNA: the intrinsic …

Translational control by ribosome pausing in bacteria: how a non-uniform pace of translation affects protein production and folding

E Samatova, J Daberger, M Liutkute… - Frontiers in …, 2021 - frontiersin.org
Protein homeostasis of bacterial cells is maintained by coordinated processes of protein
production, folding, and degradation. Translational efficiency of a given mRNA depends on …

Functions of bacterial tRNA modifications: from ubiquity to diversity

V de Crécy-Lagard, M Jaroch - Trends in Microbiology, 2021 - cell.com
Modified nucleotides in tRNA are critical components of the translation apparatus, but their
importance in the process of translational regulation had until recently been greatly …

Transcriptome-wide analysis of roles for tRNA modifications in translational regulation

HJ Chou, E Donnard, HT Gustafsson, M Garber… - Molecular cell, 2017 - cell.com
Covalent nucleotide modifications in noncoding RNAs affect a plethora of biological
processes, and new functions continue to be discovered even for well-known modifying …

Nucleoside modifications in the regulation of gene expression: focus on tRNA

M Duechler, G Leszczyńska, E Sochacka… - Cellular and Molecular …, 2016 - Springer
Both, DNA and RNA nucleoside modifications contribute to the complex multi-level
regulation of gene expression. Modified bases in tRNAs modulate protein translation rates in …

Reconstituted cell-free protein synthesis using in vitro transcribed tRNAs

K Hibi, K Amikura, N Sugiura, K Masuda… - Communications …, 2020 - nature.com
Entire reconstitution of tRNAs for active protein production in a cell-free system brings
flexibility into the genetic code engineering. It can also contribute to the field of cell-free …