An atlas of alternative splicing profiles and functional associations reveals new regulatory programs and genes that simultaneously express multiple major isoforms

J Tapial, KCH Ha, T Sterne-Weiler, A Gohr… - Genome …, 2017 - genome.cshlp.org
Alternative splicing (AS) generates remarkable regulatory and proteomic complexity in
metazoans. However, the functions of most AS events are not known, and programs of …

Systematic exploration of dynamic splicing networks reveals conserved multistage regulators of neurogenesis

H Han, AJ Best, U Braunschweig, N Mikolajewicz, JD Li… - Molecular cell, 2022 - cell.com
Alternative splicing (AS) is a critical regulatory layer; yet, factors controlling functionally
coordinated splicing programs during developmental transitions are poorly understood …

Phosphoproteomics of primary cells reveals druggable kinase signatures in ovarian cancer

C Francavilla, M Lupia, K Tsafou, A Villa, K Kowalczyk… - Cell reports, 2017 - cell.com
Our understanding of the molecular determinants of cancer is still inadequate because of
cancer heterogeneity. Here, using epithelial ovarian cancer (EOC) as a model system, we …

SMNDC1 links chromatin remodeling and splicing to regulate pancreatic hormone expression

T Casteels, S Bajew, J Reiniš, L Enders, M Schuster… - Cell Reports, 2022 - cell.com
Insulin expression is primarily restricted to the pancreatic β cells, which are physically or
functionally depleted in diabetes. Identifying targetable pathways repressing insulin in non-β …

SRp55 regulates a splicing network that controls human pancreatic β-cell function and survival

J Juan-Mateu, MI Alvelos, JV Turatsinze, O Villate… - Diabetes, 2018 - Am Diabetes Assoc
Progressive failure of insulin-producing β-cells is the central event leading to diabetes, but
the signaling networks controlling β-cell fate remain poorly understood. Here we show that …

Biallelic variants in SNUPN cause a limb girdle muscular dystrophy with myofibrillar-like features

P Iruzubieta, A Damborenea, M Ioghen, S Bajew… - Brain, 2024 - academic.oup.com
Alterations in RNA-splicing are a molecular hallmark of several neurological diseases,
including muscular dystrophies where mutations in genes involved in RNA metabolism or …

The identification of protein and RNA interactors of the splicing factor Caper in the adult Drosophila nervous system

MB Titus, AW Chang, N Popitsch… - Frontiers in Molecular …, 2023 - frontiersin.org
Post-transcriptional gene regulation is a fundamental mechanism that helps regulate the
development and healthy aging of the nervous system. Mutations that disrupt the function of …

Roles for the RNA-Binding Protein Caper in Reproductive Output in Drosophila melanogaster

EJ Tixtha, MK Super, MB Titus, JM Bono… - Journal of …, 2022 - mdpi.com
RNA binding proteins (RBPs) play a fundamental role in the post-transcriptional regulation
of gene expression within the germline and nervous system. This is underscored by the …

Alternative splicing across the C. elegans nervous system

A Weinreb, E Varol, A Barrett, RM McWhirter, SR Taylor… - bioRxiv, 2024 - biorxiv.org
Alternative splicing is a key mechanism that shapes neuronal transcriptomes, helping to
define neuronal identity and modulate function. Here, we present an atlas of alternative …

The Role of the RNA-Binding Protein Caper in Aging and Fertility

EJ Tixtha - 2022 - search.proquest.com
Aging-related diseases result in numerous forms of decline including reduction in fertility
and decrease in lifespan. Furthermore, many aging diseases have ties to …