Mining electronic health records (EHRs) A survey

P Yadav, M Steinbach, V Kumar, G Simon - ACM Computing Surveys …, 2018 - dl.acm.org
The continuously increasing cost of the US healthcare system has received significant
attention. Central to the ideas aimed at curbing this trend is the use of technology in the form …

Assessing the state of the art in biomedical relation extraction: overview of the BioCreative V chemical-disease relation (CDR) task

CH Wei, Y Peng, R Leaman, AP Davis, CJ Mattingly… - Database, 2016 - academic.oup.com
Manually curating chemicals, diseases and their relationships is significantly important to
biomedical research, but it is plagued by its high cost and the rapid growth of the biomedical …

[HTML][HTML] Clinical data reuse or secondary use: current status and potential future progress

SM Meystre, C Lovis, T Bürkle… - Yearbook of medical …, 2017 - thieme-connect.com
Objective: To perform a review of recent research in clinical data reuse or secondary use,
and envision future advances in this field. Methods: The review is based on a large literature …

A comprehensive review of computational methods for drug-drug interaction detection

Y Qiu, Y Zhang, Y Deng, S Liu… - IEEE/ACM transactions …, 2021 - ieeexplore.ieee.org
The detection of drug-drug interactions (DDIs) is a crucial task for drug safety surveillance,
which provides effective and safe co-prescriptions of multiple drugs. Since laboratory …

[HTML][HTML] A curated and standardized adverse drug event resource to accelerate drug safety research

JM Banda, L Evans, RS Vanguri, NP Tatonetti… - Scientific data, 2016 - nature.com
Identification of adverse drug reactions (ADRs) during the post-marketing phase is one of
the most important goals of drug safety surveillance. Spontaneous reporting systems (SRS) …

Text mining for adverse drug events: the promise, challenges, and state of the art

R Harpaz, A Callahan, S Tamang, Y Low, D Odgers… - Drug safety, 2014 - Springer
Text mining is the computational process of extracting meaningful information from large
amounts of unstructured text. It is emerging as a tool to leverage underutilized data sources …

“Big data” and the electronic health record

MK Ross, W Wei… - Yearbook of medical …, 2014 - thieme-connect.com
Objectives: Implementation of Electronic Health Record (EHR) systems continues to expand.
The massive number of patient encounters results in high amounts of stored data …

Natural language processing for EHR-based pharmacovigilance: a structured review

Y Luo, WK Thompson, TM Herr, Z Zeng, MA Berendsen… - Drug safety, 2017 - Springer
The goal of pharmacovigilance is to detect, monitor, characterize and prevent adverse drug
events (ADEs) with pharmaceutical products. This article is a comprehensive structured …

MCFF-MTDDI: multi-channel feature fusion for multi-typed drug–drug interaction prediction

CD Han, CC Wang, L Huang… - Briefings in …, 2023 - academic.oup.com
Adverse drug–drug interactions (DDIs) have become an increasingly serious problem in the
medical and health system. Recently, the effective application of deep learning and …

[HTML][HTML] Challenges in clinical natural language processing for automated disorder normalization

R Leaman, R Khare, Z Lu - Journal of biomedical informatics, 2015 - Elsevier
Background Identifying key variables such as disorders within the clinical narratives in
electronic health records has wide-ranging applications within clinical practice and …