The gene ontology knowledgebase in 2023

SA Aleksander, J Balhoff, S Carbon, JM Cherry… - Genetics, 2023 - academic.oup.com
Abstract The Gene Ontology (GO) knowledgebase (http://geneontology. org) is a
comprehensive resource concerning the functions of genes and gene products (proteins …

Semantic similarity and machine learning with ontologies

M Kulmanov, FZ Smaili, X Gao… - Briefings in …, 2021 - academic.oup.com
Ontologies have long been employed in the life sciences to formally represent and reason
over domain knowledge and they are employed in almost every major biological database …

[PDF][PDF] The gene ontology knowledgebase in 2023

D Ebert, M Feuermann, P Gaudet, NL Harris, DP Hill… - Genetics, 2023 - crick.figshare.com
Abstract The Gene Ontology (GO) knowledgebase (http://geneontology. org) is a
comprehensive resource concerning the functions of genes and gene products (proteins …

The human disease ontology 2022 update

LM Schriml, JB Munro, M Schor, D Olley… - Nucleic acids …, 2022 - academic.oup.com
Abstract The Human Disease Ontology (DO)(www. disease-ontology. org) database, has
significantly expanded the disease content and enhanced our userbase and website since …

The gene ontology resource: 20 years and still GOing strong

Gene Ontology Consortium - Nucleic acids research, 2019 - academic.oup.com
Abstract The Gene Ontology resource (GO; http://geneontology. org) provides structured,
computable knowledge regarding the functions of genes and gene products. Founded in …

Human Disease Ontology 2018 update: classification, content and workflow expansion

LM Schriml, E Mitraka, J Munro, B Tauber… - Nucleic acids …, 2019 - academic.oup.com
Abstract The Human Disease Ontology (DO)(http://www. disease-ontology. org), database
has undergone significant expansion in the past three years. The DO disease classification …

[图书][B] Data-centric biology: A philosophical study

S Leonelli - 2019 - degruyter.com
In recent decades, there has been a major shift in the way researchers process and
understand scientific data. Digital access to data has revolutionized ways of doing science in …

Harmonizing model organism data in the Alliance of Genome Resources

Genetics, 2022 - academic.oup.com
Abstract The Alliance of Genome Resources (the Alliance) is a combined effort of 7
knowledgebase projects: Saccharomyces Genome Database, WormBase, FlyBase, Mouse …

The ontology for biomedical investigations

A Bandrowski, R Brinkman, M Brochhausen, MH Brush… - PloS one, 2016 - journals.plos.org
The Ontology for Biomedical Investigations (OBI) is an ontology that provides terms with
precisely defined meanings to describe all aspects of how investigations in the biological …

Disease Ontology: a backbone for disease semantic integration

LM Schriml, C Arze, S Nadendla… - Nucleic acids …, 2012 - academic.oup.com
Abstract The Disease Ontology (DO) database (http://disease-ontology. org) represents a
comprehensive knowledge base of 8043 inherited, developmental and acquired human …