[HTML][HTML] Allostery in disease and in drug discovery
R Nussinov, CJ Tsai - Cell, 2013 - cell.com
Allostery is largely associated with conformational and functional transitions in individual
proteins. This concept can be extended to consider the impact of conformational …
proteins. This concept can be extended to consider the impact of conformational …
Genome architecture: domain organization of interphase chromosomes
WA Bickmore, B Van Steensel - Cell, 2013 - cell.com
The architecture of interphase chromosomes is important for the regulation of gene
expression and genome maintenance. Chromosomes are linearly segmented into hundreds …
expression and genome maintenance. Chromosomes are linearly segmented into hundreds …
High-resolution TADs reveal DNA sequences underlying genome organization in flies
Despite an abundance of new studies about topologically associating domains (TADs), the
role of genetic information in TAD formation is still not fully understood. Here we use our …
role of genetic information in TAD formation is still not fully understood. Here we use our …
[HTML][HTML] Chromosome conformation capture and beyond: toward an integrative view of chromosome structure and function
Rapidly developing technologies have recently fueled an exciting era of discovery in the
field of chromosome structure and nuclear organization. In addition to chromosome …
field of chromosome structure and nuclear organization. In addition to chromosome …
Chromosome territories
Chromosome territories (CTs) constitute a major feature of nuclear architecture. In a brief
statement, the possible contribution of nuclear architecture studies to the field of …
statement, the possible contribution of nuclear architecture studies to the field of …
Chromatin-associated RNAs as facilitators of functional genomic interactions
X Li, XD Fu - Nature Reviews Genetics, 2019 - nature.com
Mammalian genomes are extensively transcribed, which produces a large number of both
coding and non-coding transcripts. Various RNAs are physically associated with chromatin …
coding and non-coding transcripts. Various RNAs are physically associated with chromatin …
[HTML][HTML] Functional and mechanistic diversity of distal transcription enhancers
M Bulger, M Groudine - Cell, 2011 - cell.com
Biological differences among metazoans and between cell types in a given organism arise
in large part due to differences in gene expression patterns. Gene-distal enhancers are key …
in large part due to differences in gene expression patterns. Gene-distal enhancers are key …
Biogenesis and function of nuclear bodies
YS Mao, B Zhang, DL Spector - Trends in Genetics, 2011 - cell.com
Nuclear bodies including nucleoli, Cajal bodies, nuclear speckles, Polycomb bodies, and
paraspeckles are membraneless subnuclear organelles. They are present at steady-state …
paraspeckles are membraneless subnuclear organelles. They are present at steady-state …
A large fraction of extragenic RNA pol II transcription sites overlap enhancers
F De Santa, I Barozzi, F Mietton, S Ghisletti… - PLoS …, 2010 - journals.plos.org
Mammalian genomes are pervasively transcribed outside mapped protein-coding genes.
One class of extragenic transcription products is represented by long non-coding RNAs …
One class of extragenic transcription products is represented by long non-coding RNAs …
Real-time dynamics of RNA polymerase II clustering in live human cells
Transcription is reported to be spatially compartmentalized in nuclear transcription factories
with clusters of RNA polymerase II (Pol II). However, little is known about when these foci …
with clusters of RNA polymerase II (Pol II). However, little is known about when these foci …