Rare-variant association analysis: study designs and statistical tests

S Lee, GR Abecasis, M Boehnke, X Lin - The American Journal of Human …, 2014 - cell.com
Despite the extensive discovery of trait-and disease-associated common variants, much of
the genetic contribution to complex traits remains unexplained. Rare variants can explain …

Role of genetic testing for inherited prostate cancer risk: Philadelphia Prostate Cancer Consensus Conference 2017

VN Giri, KE Knudsen, WK Kelly, W Abida… - Journal of Clinical …, 2018 - ascopubs.org
Purpose Guidelines are limited for genetic testing for prostate cancer (PCA). The goal of this
conference was to develop an expert consensus-driven working framework for …

Trans-ancestry genome-wide association meta-analysis of prostate cancer identifies new susceptibility loci and informs genetic risk prediction

DV Conti, BF Darst, LC Moss, EJ Saunders, X Sheng… - Nature …, 2021 - nature.com
Prostate cancer is a highly heritable disease with large disparities in incidence rates across
ancestry populations. We conducted a multiancestry meta-analysis of prostate cancer …

Characterizing prostate cancer risk through multi-ancestry genome-wide discovery of 187 novel risk variants

A Wang, J Shen, AA Rodriguez, EJ Saunders, F Chen… - Nature …, 2023 - nature.com
The transferability and clinical value of genetic risk scores (GRSs) across populations
remain limited due to an imbalance in genetic studies across ancestrally diverse …

Genetic analyses of diverse populations improves discovery for complex traits

GL Wojcik, M Graff, KK Nishimura, R Tao, J Haessler… - Nature, 2019 - nature.com
Genome-wide association studies (GWAS) have laid the foundation for investigations into
the biology of complex traits, drug development and clinical guidelines. However, the …

Rare and low-frequency coding variants alter human adult height

E Marouli, M Graff, C Medina-Gomez, KS Lo, AR Wood… - Nature, 2017 - nature.com
Height is a highly heritable, classic polygenic trait with approximately 700 common
associated variants identified through genome-wide association studies so far. Here, we …

Large-scale whole-genome sequencing of the Icelandic population

DF Gudbjartsson, H Helgason, SA Gudjonsson, F Zink… - Nature …, 2015 - nature.com
Here we describe the insights gained from sequencing the whole genomes of 2,636
Icelanders to a median depth of 20×. We found 20 million SNPs and 1.5 million insertions …

Fast and accurate long-range phasing in a UK Biobank cohort

PR Loh, PF Palamara, AL Price - Nature genetics, 2016 - nature.com
Recent work has leveraged the extensive genotyping of the Icelandic population to perform
long-range phasing (LRP), enabling accurate imputation and association analysis of rare …

Distribution and medical impact of loss-of-function variants in the Finnish founder population

ET Lim, P Würtz, AS Havulinna, P Palta… - PLoS …, 2014 - journals.plos.org
Exome sequencing studies in complex diseases are challenged by the allelic heterogeneity,
large number and modest effect sizes of associated variants on disease risk and the …

Loss-of-function mutations in SLC30A8 protect against type 2 diabetes

J Flannick, G Thorleifsson, NL Beer, SBR Jacobs… - Nature …, 2014 - nature.com
Loss-of-function mutations protective against human disease provide in vivo validation of
therapeutic targets,,, but none have yet been described for type 2 diabetes (T2D). Through …