Evaluation of an optimized germline exomes pipeline using BWA-MEM2 and Dragen-GATK tools
N Alganmi, H Abusamra - PLoS One, 2023 - journals.plos.org
The next-generation sequencing (NGS) technology represents a significant advance in
genomics and medical diagnosis. Nevertheless, the time it takes to perform sequencing …
genomics and medical diagnosis. Nevertheless, the time it takes to perform sequencing …
ChimericFragments: computation, analysis and visualization of global RNA networks
M Siemers, A Lippegaus… - NAR Genomics and …, 2024 - academic.oup.com
RNA–RNA interactions are a key feature of post-transcriptional gene regulation in all
domains of life. While ever more experimental protocols are being developed to study RNA …
domains of life. While ever more experimental protocols are being developed to study RNA …
cPlot: Contig-Plotting Visualization for the Analysis of Short-Read Nucleotide Sequence Alignments
M Ji, Y Kan, D Kim, J Jung, G Yi - International Journal of Molecular …, 2022 - mdpi.com
Advances in the next-generation sequencing technology have led to a dramatic decrease in
read-generation cost and an increase in read output. Reconstruction of short DNA sequence …
read-generation cost and an increase in read output. Reconstruction of short DNA sequence …
Methods and tools for characterizing microbial communities in the context of chronic diseases
AR Odom - 2024 - open.bu.edu
The human microbiome, a complex ecosystem of microorganisms inhabiting various body
sites, plays a crucial role in the immune system and overall human health. A comprehensive …
sites, plays a crucial role in the immune system and overall human health. A comprehensive …