Mitochondrial DNA variation and cancer

PK Kopinski, LN Singh, S Zhang, MT Lott… - Nature Reviews …, 2021 - nature.com
Variation in the mitochondrial DNA (mtDNA) sequence is common in certain tumours. Two
classes of cancer mtDNA variants can be identified: de novo mutations that act as 'inducers' …

Best practices for the interpretation and reporting of clinical whole genome sequencing

CA Austin-Tse, V Jobanputra, DL Perry, D Bick… - NPJ genomic …, 2022 - nature.com
Whole genome sequencing (WGS) shows promise as a first-tier diagnostic test for patients
with rare genetic disorders. However, standards addressing the definition and deployment …

Inadvertent human genomic bycatch and intentional capture raise beneficial applications and ethical concerns with environmental DNA

L Whitmore, M McCauley, JA Farrell… - Nature Ecology & …, 2023 - nature.com
The field of environmental DNA (eDNA) is advancing rapidly, yet human eDNA applications
remain underutilized and underconsidered. Broader adoption of eDNA analysis will produce …

Mitochondrial DNA variation across 56,434 individuals in gnomAD

KM Laricchia, NJ Lake, NA Watts, M Shand… - Genome …, 2022 - genome.cshlp.org
Genomic databases of allele frequency are extremely helpful for evaluating clinical variants
of unknown significance; however, until now, databases such as the Genome Aggregation …

In vivo imaging of mitochondrial DNA mutations using an integrated nano Cas12a sensor

Y Li, Y Wu, R Xu, J Guo, F Quan, Y Zhang… - Nature …, 2023 - nature.com
Mutations in mitochondrial DNA (mtDNA) play critical roles in many human diseases. In vivo
visualization of cells bearing mtDNA mutations is important for resolving the complexity of …

Newborn screening by genomic sequencing: opportunities and challenges

D Bick, A Ahmed, D Deen, A Ferlini, N Garnier… - International Journal of …, 2022 - mdpi.com
Newborn screening for treatable disorders is one of the great public health success stories
of the twentieth century worldwide. This commentary examines the potential use of a new …

Deleterious heteroplasmic mitochondrial mutations are associated with an increased risk of overall and cancer-specific mortality

YS Hong, SL Battle, W Shi, D Puiu… - Nature …, 2023 - nature.com
Mitochondria carry their own circular genome and disruption of the mitochondrial genome is
associated with various aging-related diseases. Unlike the nuclear genome, mitochondrial …

Clinical Pharmacogenetics Implementation Consortium Guideline for the Use of Aminoglycosides Based on MT‐RNR1 Genotype

JH McDermott, J Wolf, K Hoshitsuki… - Clinical …, 2022 - Wiley Online Library
Aminoglycosides are widely used antibiotics with notable side effects, such as
nephrotoxicity, vestibulotoxicity, and sensorineural hearing loss (cochleotoxicity). MT‐RNR1 …

Genetic testing for mitochondrial disease: the United Kingdom best practice guidelines

E Mavraki, R Labrum, K Sergeant, CL Alston… - European Journal of …, 2023 - nature.com
Primary mitochondrial disease describes a diverse group of neuro-metabolic disorders
characterised by impaired oxidative phosphorylation. Diagnosis is challenging;> 350 genes …

Targeted sequencing approach and its clinical applications for the molecular diagnosis of human diseases

XM Pei, MHY Yeung, ANN Wong, HF Tsang, ACS Yu… - Cells, 2023 - mdpi.com
The outbreak of COVID-19 has positively impacted the NGS market recently. Targeted
sequencing (TS) has become an important routine technique in both clinical and research …