A new era in functional genomics screens

L Przybyla, LA Gilbert - Nature Reviews Genetics, 2022 - nature.com
The past 25 years of genomics research first revealed which genes are encoded by the
human genome and then a detailed catalogue of human genome variation associated with …

Dissecting metastasis using preclinical models and methods

JD Hebert, JW Neal, MM Winslow - Nature Reviews Cancer, 2023 - nature.com
Metastasis has long been understood to lead to the overwhelming majority of cancer-related
deaths. However, our understanding of the metastatic process, and thus our ability to …

[HTML][HTML] Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution

D Yang, MG Jones, S Naranjo, WM Rideout, KHJ Min… - Cell, 2022 - cell.com
Tumor evolution is driven by the progressive acquisition of genetic and epigenetic
alterations that enable uncontrolled growth and expansion to neighboring and distal tissues …

CRISPR screens in cancer spheroids identify 3D growth-specific vulnerabilities

K Han, SE Pierce, A Li, K Spees, GR Anderson… - Nature, 2020 - nature.com
Cancer genomics studies have identified thousands of putative cancer driver genes.
Development of high-throughput and accurate models to define the functions of these genes …

Single-cell lineages reveal the rates, routes, and drivers of metastasis in cancer xenografts

JJ Quinn, MG Jones, RA Okimoto, S Nanjo, MM Chan… - Science, 2021 - science.org
INTRODUCTION Cancer progression is fundamentally an evolutionary process, involving
multiple distinct steps from oncogenic transformation to metastatic dissemination to …

An analysis of genetic heterogeneity in untreated cancers

JG Reiter, M Baretti, JM Gerold… - Nature Reviews …, 2019 - nature.com
Genetic intratumoural heterogeneity is a natural consequence of imperfect DNA replication.
Any two randomly selected cells, whether normal or cancerous, are therefore genetically …

Characterizing the ecological and evolutionary dynamics of cancer

N Zahir, R Sun, D Gallahan, RA Gatenby, C Curtis - Nature genetics, 2020 - nature.com
Tumor initiation and progression are somatic evolutionary processes driven by the
accumulation of genetic alterations, some of which confer selective fitness advantages to the …

CRISPR–Cas: a tool for cancer research and therapeutics

H Yin, W Xue, DG Anderson - Nature reviews Clinical oncology, 2019 - nature.com
In the past decade, the development of a genome-editing technology mediated by CRISPR
has made genetic engineering easier than ever, both in vitro and in vivo. CRISPR systems …

Microfluidics guided by deep learning for cancer immunotherapy screening

Z Ao, H Cai, Z Wu, L Hu, A Nunez… - Proceedings of the …, 2022 - National Acad Sciences
Immunocyte infiltration and cytotoxicity play critical roles in both inflammation and
immunotherapy. However, current cancer immunotherapy screening methods overlook the …

Harnessing the predictive power of preclinical models for oncology drug development

A Honkala, SV Malhotra, S Kummar… - Nature reviews Drug …, 2022 - nature.com
Recent progress in understanding the molecular basis of cellular processes, identification of
promising therapeutic targets and evolution of the regulatory landscape makes this an …