Indexing highly repetitive string collections, part II: Compressed indexes

G Navarro - ACM Computing Surveys (CSUR), 2021 - dl.acm.org
Two decades ago, a breakthrough in indexing string collections made it possible to
represent them within their compressed space while at the same time offering indexed …

The sequence of the human genome

JC Venter, MD Adams, EW Myers, PW Li, RJ Mural… - science, 2001 - science.org
A 2.91-billion base pair (bp) consensus sequence of the euchromatic portion of the human
genome was generated by the whole-genome shotgun sequencing method. The 14.8-billion …

A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

RJ Elshire, JC Glaubitz, Q Sun, JA Poland… - PloS one, 2011 - journals.plos.org
Advances in next generation technologies have driven the costs of DNA sequencing down
to the point that genotyping-by-sequencing (GBS) is now feasible for high diversity, large …

Fully functional suffix trees and optimal text searching in BWT-runs bounded space

T Gagie, G Navarro, N Prezza - Journal of the ACM (JACM), 2020 - dl.acm.org
Indexing highly repetitive texts—such as genomic databases, software repositories and
versioned text collections—has become an important problem since the turn of the …

The cognitive niche: Coevolution of intelligence, sociality, and language

S Pinker - Proceedings of the National Academy of …, 2010 - National Acad Sciences
Although Darwin insisted that human intelligence could be fully explained by the theory of
evolution, the codiscoverer of natural selection, Alfred Russel Wallace, claimed that abstract …

Structural variation in the human genome

L Feuk, AR Carson, SW Scherer - Nature Reviews Genetics, 2006 - nature.com
The first wave of information from the analysis of the human genome revealed SNPs to be
the main source of genetic and phenotypic human variation. However, the advent of genome …

[图书][B] Evolution: Probleme—Themen—Fragen

M Ridley - 2013 - books.google.com
Beim Studium der jüngeren Kontroversen über den Darwinismus fiel mir wiederholt auf, das
sie falsche Darstellungen enthielten, so als würde es sich um irgendetwas Umfassenderes …

Linkage disequilibrium in humans: models and data

JK Pritchard, M Przeworski - The American Journal of Human Genetics, 2001 - cell.com
In this review, we describe recent empirical and theoretical work on the extent of linkage
disequilibrium (LD) in the human genome, comparing the predictions of simple population …

[HTML][HTML] Effect of VKORC1 Haplotypes on Transcriptional Regulation and Warfarin Dose

MJ Rieder, AP Reiner, BF Gage… - … England Journal of …, 2005 - Mass Medical Soc
Background The management of warfarin therapy is complicated by a wide variation among
patients in drug response. Variants in the gene encoding vitamin K epoxide reductase …

Whole-genome sequencing provides insights into the genetic diversity and domestication of bitter gourd (Momordica spp.)

J Cui, Y Yang, S Luo, L Wang, R Huang… - Horticulture …, 2020 - academic.oup.com
Bitter gourd (Momordica charantia) is a popular cultivated vegetable in Asian and African
countries. To reveal the characteristics of the genomic structure, evolutionary trajectory, and …