Small-cell lung cancer

CM Rudin, E Brambilla, C Faivre-Finn… - Nature Reviews Disease …, 2021 - nature.com
Small-cell lung cancer (SCLC) represents about 15% of all lung cancers and is marked by
an exceptionally high proliferative rate, strong predilection for early metastasis and poor …

Overcoming cancer therapeutic bottleneck by drug repurposing

Z Zhang, L Zhou, N Xie, EC Nice, T Zhang… - Signal transduction and …, 2020 - nature.com
Ever present hurdles for the discovery of new drugs for cancer therapy have necessitated
the development of the alternative strategy of drug repurposing, the development of old …

Integrative genome analyses identify key somatic driver mutations of small-cell lung cancer

M Peifer, L Fernández-Cuesta, ML Sos, J George… - Nature …, 2012 - nature.com
Small-cell lung cancer (SCLC) is an aggressive lung tumor subtype with poor prognosis,,.
We sequenced 29 SCLC exomes, 2 genomes and 15 transcriptomes and found an …

Next-generation proteomics: towards an integrative view of proteome dynamics

AFM Altelaar, J Munoz, AJR Heck - Nature Reviews Genetics, 2013 - nature.com
Next-generation sequencing allows the analysis of genomes, including those representing
disease states. However, the causes of most disorders are multifactorial, and systems-level …

Rise of deep learning for genomic, proteomic, and metabolomic data integration in precision medicine

D Grapov, J Fahrmann, K Wanichthanarak… - Omics: a journal of …, 2018 - liebertpub.com
Abstract Machine learning (ML) is being ubiquitously incorporated into everyday products
such as Internet search, email spam filters, product recommendations, image classification …

Proteomic challenges: sample preparation techniques for microgram-quantity protein analysis from biological samples

P Feist, AB Hummon - International journal of molecular sciences, 2015 - mdpi.com
Proteins regulate many cellular functions and analyzing the presence and abundance of
proteins in biological samples are central focuses in proteomics. The discovery and …

Syndecan 1 is a critical mediator of macropinocytosis in pancreatic cancer

W Yao, JL Rose, W Wang, S Seth, H Jiang, A Taguchi… - Nature, 2019 - nature.com
Pancreatic ductal adenocarcinoma (PDAC) remains recalcitrant to all forms of cancer
treatment and carries a five-year survival rate of only 8%. Inhibition of oncogenic KRAS …

Inhibition of the Nrf2 transcription factor by the alkaloid trigonelline renders pancreatic cancer cells more susceptible to apoptosis through decreased proteasomal …

A Arlt, S Sebens, S Krebs, C Geismann, M Grossmann… - Oncogene, 2013 - nature.com
Evidence accumulates that the transcription factor nuclear factor E2-related factor 2 (Nrf2)
has an essential role in cancer development and chemoresistance, thus pointing to its …

Molecular portraits of epithelial, mesenchymal, and hybrid States in lung adenocarcinoma and their relevance to survival

MJ Schliekelman, A Taguchi, J Zhu, X Dai, J Rodriguez… - Cancer research, 2015 - AACR
Epithelial-to-mesenchymal transition (EMT) is a key process associated with tumor
progression and metastasis. To define molecular features associated with EMT states, we …

Immunoproteasome deficiency is a feature of non-small cell lung cancer with a mesenchymal phenotype and is associated with a poor outcome

SC Tripathi, HL Peters, A Taguchi… - Proceedings of the …, 2016 - National Acad Sciences
The immunoproteasome plays a key role in generation of HLA peptides for T cell-mediated
immunity. Integrative genomic and proteomic analysis of non-small cell lung carcinoma …