Evolution and genome architecture in fungal plant pathogens
M Möller, EH Stukenbrock - Nature Reviews Microbiology, 2017 - nature.com
The fungal kingdom comprises some of the most devastating plant pathogens. Sequencing
the genomes of fungal pathogens has shown a remarkable variability in genome size and …
the genomes of fungal pathogens has shown a remarkable variability in genome size and …
Histone methylation by SET domain proteins in fungi
M Freitag - Annual review of microbiology, 2017 - annualreviews.org
Histone-modifying enzymes are responsible for regulating transcription, recombination, DNA
repair, DNA replication, chromatid cohesion, and chromosome segregation. Fungi are …
repair, DNA replication, chromatid cohesion, and chromosome segregation. Fungi are …
A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen
Human activity impacts the evolutionary trajectories of many species worldwide. Global
trade of agricultural goods contributes to the dispersal of pathogens reshaping their genetic …
trade of agricultural goods contributes to the dispersal of pathogens reshaping their genetic …
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
SB Goodwin, S Ben M'Barek, B Dhillon… - PLoS …, 2011 - journals.plos.org
The plant-pathogenic fungus Mycosphaerella graminicola (asexual stage: Septoria tritici)
causes septoria tritici blotch, a disease that greatly reduces the yield and quality of wheat …
causes septoria tritici blotch, a disease that greatly reduces the yield and quality of wheat …
Recent transposable element bursts are associated with the proximity to genes in a fungal plant pathogen
U Oggenfuss, D Croll - PLoS Pathogens, 2023 - journals.plos.org
The activity of transposable elements (TEs) contributes significantly to pathogen genome
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …
evolution. TEs often destabilize genome integrity but may also confer adaptive variation in …
Accessories make the outfit: accessory chromosomes and other dispensable DNA regions in plant-pathogenic fungi
Fungal pathogen genomes can often be divided into core and accessory regions. Accessory
regions ARs) may be comprised of either ARs (within core chromosomes (CCs) or wholly …
regions ARs) may be comprised of either ARs (within core chromosomes (CCs) or wholly …
Histone modifications rather than the novel regional centromeres of Zymoseptoria tritici distinguish core and accessory chromosomes
K Schotanus, JL Soyer, LR Connolly… - Epigenetics & …, 2015 - Springer
Background Supernumerary chromosomes have been found in many organisms. In fungi,
these “accessory” or “dispensable” chromosomes are present at different frequencies in …
these “accessory” or “dispensable” chromosomes are present at different frequencies in …
Genome-wide profiling of DNA methylation provides insights into epigenetic regulation of fungal development in a plant pathogenic fungus, Magnaporthe oryzae
DNA methylation is an important epigenetic modification that regulates development of
plants and mammals. To investigate the roles of DNA methylation in fungal development, we …
plants and mammals. To investigate the roles of DNA methylation in fungal development, we …
RNA-seq-Based Gene Annotation and Comparative Genomics of Four Fungal Grass Pathogens in the Genus Zymoseptoria Identify Novel Orphan Genes and …
J Grandaubert, A Bhattacharyya… - G3: Genes, Genomes …, 2015 - academic.oup.com
The fungal pathogen Zymoseptoria tritici (synonym Mycosphaerella graminicola) is a
prominent pathogen of wheat. The reference genome of the isolate IPO323 is one of the best …
prominent pathogen of wheat. The reference genome of the isolate IPO323 is one of the best …
Dynamics of transposable elements in recently diverged fungal pathogens: lineage-specific transposable element content and efficiency of genome defenses
Transposable elements (TEs) impact genome plasticity, architecture, and evolution in fungal
plant pathogens. The wide range of TE content observed in fungal genomes reflects diverse …
plant pathogens. The wide range of TE content observed in fungal genomes reflects diverse …