Examining horizontal gene transfer in microbial communities
IL Brito - Nature Reviews Microbiology, 2021 - nature.com
Bacteria acquire novel DNA through horizontal gene transfer (HGT), a process that enables
an organism to rapidly adapt to changing environmental conditions, provides a competitive …
an organism to rapidly adapt to changing environmental conditions, provides a competitive …
Mutualistic interplay between bacteriophages and bacteria in the human gut
Bacteriophages (phages) are often described as obligate predators of their bacterial hosts,
and phage predation is one of the leading forces controlling the density and distribution of …
and phage predation is one of the leading forces controlling the density and distribution of …
High-throughput, single-microbe genomics with strain resolution, applied to a human gut microbiome
W Zheng, S Zhao, Y Yin, H Zhang, DM Needham… - Science, 2022 - science.org
Characterizing complex microbial communities with single-cell resolution has been a long-
standing goal of microbiology. We present Microbe-seq, a high-throughput method that …
standing goal of microbiology. We present Microbe-seq, a high-throughput method that …
Viruses interact with hosts that span distantly related microbial domains in dense hydrothermal mats
Many microbes in nature reside in dense, metabolically interdependent communities. We
investigated the nature and extent of microbe-virus interactions in relation to microbial …
investigated the nature and extent of microbe-virus interactions in relation to microbial …
Revisiting the rules of life for viruses of microorganisms
Viruses that infect microbial hosts have traditionally been studied in laboratory settings with
a focus on either obligate lysis or persistent lysogeny. In the environment, these infection …
a focus on either obligate lysis or persistent lysogeny. In the environment, these infection …
Single-cell approaches in human microbiome research
V Lloréns-Rico, JA Simcock, GRB Huys, J Raes - Cell, 2022 - cell.com
Microbial culturing and meta-omic profiling technologies have significantly advanced our
understanding of the taxonomic and functional variation of the human microbiome and its …
understanding of the taxonomic and functional variation of the human microbiome and its …
Extensive gut virome variation and its associations with host and environmental factors in a population-level cohort
S Nishijima, N Nagata, Y Kiguchi, Y Kojima… - Nature …, 2022 - nature.com
Indigenous bacteriophage communities (virome) in the human gut have a huge impact on
the structure and function of gut bacterial communities (bacteriome), but virome variation at a …
the structure and function of gut bacterial communities (bacteriome), but virome variation at a …
Gut virome profiling identifies a widespread bacteriophage family associated with metabolic syndrome
PA de Jonge, K Wortelboer, TPM Scheithauer… - Nature …, 2022 - nature.com
There is significant interest in altering the course of cardiometabolic disease development
via gut microbiomes. Nevertheless, the highly abundant phage members of the complex gut …
via gut microbiomes. Nevertheless, the highly abundant phage members of the complex gut …
Understanding the impacts of bacteriophage viruses: from laboratory evolution to natural ecosystems
B Koskella, CA Hernandez… - Annual Review of …, 2022 - annualreviews.org
Viruses of bacteria (bacteriophages or phage) have broad effects on bacterial ecology and
evolution in nature that mediate microbial interactions, shape bacterial diversity, and …
evolution in nature that mediate microbial interactions, shape bacterial diversity, and …
Resolving the structure of phage–bacteria interactions in the context of natural diversity
Microbial communities are shaped by viral predators. Yet, resolving which viruses (phages)
and bacteria are interacting is a major challenge in the context of natural levels of microbial …
and bacteria are interacting is a major challenge in the context of natural levels of microbial …