The genomic landscape of pediatric acute lymphoblastic leukemia

SW Brady, KG Roberts, Z Gu, L Shi, S Pounds, D Pei… - Nature …, 2022 - nature.com
Acute lymphoblastic leukemia (ALL) is the most common childhood cancer. Here, using
whole-genome, exome and transcriptome sequencing of 2,754 childhood patients with ALL …

Hiplot: a comprehensive and easy-to-use web service for boosting publication-ready biomedical data visualization

J Li, B Miao, S Wang, W Dong, H Xu, C Si… - Briefings in …, 2022 - academic.oup.com
Complex biomedical data generated during clinical, omics and mechanism-based
experiments have increasingly been exploited through cloud-and visualization-based data …

Immunotherapy for SMARCB1-deficient sarcomas: current evidence and future developments

C Ngo, S Postel-Vinay - Biomedicines, 2022 - mdpi.com
Mutations in subunits of the SWItch Sucrose Non-Fermentable (SWI/SNF) complex occur in
20% of all human tumors. Among these, the core subunit SMARCB1 is the most frequently …

Genomes for kids: the scope of pathogenic mutations in pediatric cancer revealed by comprehensive DNA and RNA sequencing

S Newman, J Nakitandwe, CA Kesserwan, EM Azzato… - Cancer discovery, 2021 - AACR
Genomic studies of pediatric cancer have primarily focused on specific tumor types or high-
risk disease. Here, we used a three-platform sequencing approach, including whole …

A new genomic framework to categorize pediatric acute myeloid leukemia

M Umeda, J Ma, T Westover, Y Ni, G Song… - Nature Genetics, 2024 - nature.com
Recent studies on pediatric acute myeloid leukemia (pAML) have revealed pediatric-specific
driver alterations, many of which are underrepresented in the current classification schemas …

St. Jude Cloud: a pediatric cancer genomic data-sharing ecosystem

C McLeod, AM Gout, X Zhou, A Thrasher, D Rahbarinia… - Cancer discovery, 2021 - AACR
Effective data sharing is key to accelerating research to improve diagnostic precision,
treatment efficacy, and long-term survival in pediatric cancer and other childhood …

Metabolomics in acute myeloid leukemia

AV Wojcicki, MM Kasowski, KM Sakamoto… - Molecular Genetics and …, 2020 - Elsevier
Acute myeloid leukemia (AML) is a complex, heterogenous hematological malignancy
caused by mutations in myeloid differentiation and proliferation. Response to therapy and …

Integrated Genomic Analysis Identifies UBTF Tandem Duplications as a Recurrent Lesion in Pediatric Acute Myeloid Leukemia

M Umeda, J Ma, BJ Huang, K Hagiwara, T Westover… - Blood cancer …, 2022 - AACR
The genetics of relapsed pediatric acute myeloid leukemia (AML) has yet to be
comprehensively defined. Here, we present the spectrum of genomic alterations in 136 …

NSD1 mediates antagonism between SWI/SNF and polycomb complexes and is required for transcriptional activation upon EZH2 inhibition

Y Drosos, JA Myers, B Xu, KM Mathias, EC Beane… - Molecular cell, 2022 - cell.com
Disruption of antagonism between SWI/SNF chromatin remodelers and polycomb repressor
complexes drives the formation of numerous cancer types. Recently, an inhibitor of the …

Distinct genomic landscape of Chinese pediatric acute myeloid leukemia impacts clinical risk classification

T Liu, J Rao, W Hu, B Cui, J Cai, Y Liu, H Sun… - Nature …, 2022 - nature.com
Studies have revealed key genomic aberrations in pediatric acute myeloid leukemia (AML)
based on Western populations. It is unknown to what extent the current genomic findings …