[HTML][HTML] Physicochemical mechanisms of protein regulation by phosphorylation
Phosphorylation offers a dynamic way to regulate protein activity and subcellular
localization, which is achieved through its reversibility and fast kinetics. Adding or removing …
localization, which is achieved through its reversibility and fast kinetics. Adding or removing …
Comparative analysis of gene regulatory networks: from network reconstruction to evolution
D Thompson, A Regev, S Roy - Annual review of cell and …, 2015 - annualreviews.org
Regulation of gene expression is central to many biological processes. Although
reconstruction of regulatory circuits from genomic data alone is therefore desirable, this …
reconstruction of regulatory circuits from genomic data alone is therefore desirable, this …
[HTML][HTML] Cell cycle-specific phase separation regulated by protein charge blockiness
H Yamazaki, M Takagi, H Kosako, T Hirano… - Nature Cell …, 2022 - nature.com
Dynamic morphological changes of intracellular organelles are often regulated by protein
phosphorylation or dephosphorylation,,,,–. Phosphorylation modulates stereospecific …
phosphorylation or dephosphorylation,,,,–. Phosphorylation modulates stereospecific …
High-throughput functional characterization of protein phosphorylation sites in yeast
Phosphorylation is a critical post-translational modification involved in the regulation of
almost all cellular processes. However, fewer than 5% of thousands of recently discovered …
almost all cellular processes. However, fewer than 5% of thousands of recently discovered …
Evolution of protein phosphorylation across 18 fungal species
Living organisms have evolved protein phosphorylation, a rapid and versatile mechanism
that drives signaling and regulates protein function. We report the phosphoproteomes of 18 …
that drives signaling and regulates protein function. We report the phosphoproteomes of 18 …
[PDF][PDF] Sequence and structure-based analysis of specificity determinants in eukaryotic protein kinases
Protein kinases lie at the heart of cell-signaling processes and are often mutated in disease.
Kinase target recognition at the active site is in part determined by a few amino acids around …
Kinase target recognition at the active site is in part determined by a few amino acids around …
[PDF][PDF] Kinase interaction network expands functional and disease roles of human kinases
M Buljan, R Ciuffa, A van Drogen, A Vichalkovski… - Molecular cell, 2020 - cell.com
Protein kinases are essential for signal transduction and control of most cellular processes,
including metabolism, membrane transport, motility, and cell cycle. Despite the critical role of …
including metabolism, membrane transport, motility, and cell cycle. Despite the critical role of …
A theoretical framework for evolutionary cell biology
M Lynch, B Trickovic - Journal of molecular biology, 2020 - Elsevier
One of the last uncharted territories in evolutionary biology concerns the link with cell
biology. Because all phenotypes ultimately derive from events at the cellular level, this …
biology. Because all phenotypes ultimately derive from events at the cellular level, this …
Found in translation: functions and evolution of a recently discovered alternative proteome
Highlights•Small proteins play big roles in cell biology.•Small proteins are underrepresented
in proteomics datasets because of experimental and observational biases.•Ribosome …
in proteomics datasets because of experimental and observational biases.•Ribosome …
[HTML][HTML] Phosphorylation sites in protein kinases and phosphatases regulated by formyl peptide receptor 2 signaling
MC Annunziata, M Parisi, G Esposito… - International Journal of …, 2020 - mdpi.com
FPR1, FPR2, and FPR3 are members of Formyl Peptides Receptors (FPRs) family
belonging to the GPCR superfamily. FPR2 is a low affinity receptor for formyl peptides and it …
belonging to the GPCR superfamily. FPR2 is a low affinity receptor for formyl peptides and it …