Automated reconstruction of neuronal morphology: an overview

DE Donohue, GA Ascoli - Brain research reviews, 2011 - Elsevier
Digital reconstruction of neuronal morphology is a powerful technique for investigating the
nervous system. This process consists of tracing the axonal and dendritic arbors of neurons …

Increased dentate gyrus excitability in neuroligin-2-deficient mice in vivo

P Jedlicka, M Hoon, T Papadopoulos, A Vlachos… - Cerebral …, 2011 - academic.oup.com
The postsynaptic adhesion protein neuroligin-2 (NL2) is selectively localized at inhibitory
synapses. Here, we studied network activity in the dentate gyrus of NL2-deficient mice …

Signal propagation in oblique dendrites of CA1 pyramidal cells

M Migliore, M Ferrante… - Journal of …, 2005 - journals.physiology.org
The electrophysiological properties of the oblique branches of CA1 pyramidal neurons are
largely unknown and very difficult to investigate experimentally. These relatively thin …

A cross-platform freeware tool for digital reconstruction of neuronal arborizations from image stacks

KM Brown, DE Donohue, G D'Alessandro, GA Ascoli - Neuroinformatics, 2005 - Springer
Digital reconstruction of neuronal arborizations is an important step in the quantitative
investigation of cellular neuroanatomy. In this process, neurites imaged by microscopy are …

Computational modeling of GABAA receptor-mediated paired-pulse inhibition in the dentate gyrus

P Jedlicka, T Deller, SW Schwarzacher - Journal of computational …, 2010 - Springer
Paired-pulse inhibition (PPI) of the population spike observed in extracellular field
recordings is widely used as a read-out of hippocampal network inhibition. PPI reflects …

The CIPRES workbench: a flexible framework for creating science gateways

MA Miller, T Schwartz, P Hoover, K Yoshimoto… - Proceedings of the …, 2015 - dl.acm.org
Here we describe the CIPRES Workbench (CW), an open source software framework for
creating new science gateways with minimal overhead. The CW is a web application that …

SenseLab: new developments in disseminating neuroscience information

CJ Crasto, LN Marenco, N Liu, TM Morse… - Briefings in …, 2007 - academic.oup.com
This article presents the latest developments in neuroscience information dissemination
through the SenseLab suite of databases: NeuronDB, CellPropDB, ORDB, OdorDB …

Reduced excitability in the dentate gyrus network of βIV‐spectrin mutant mice in vivo

R Winkels, P Jedlicka, FK Weise, C Schultz… - …, 2009 - Wiley Online Library
The submembrane cytoskeletal meshwork of the axon contains the scaffolding protein βIV‐
spectrin. It provides mechanical support for the axon and anchors membrane proteins …

Multiple firing patterns in deep dorsal horn neurons of the spinal cord: computational analysis of mechanisms and functional implications

Y Le Franc, G Le Masson - Journal of neurophysiology, 2010 - journals.physiology.org
Deep dorsal horn relay neurons (dDHNs) of the spinal cord are known to exhibit multiple
firing patterns under the control of local metabotropic neuromodulation: tonic firing, plateau …

Computational simulation of the input-output relationship in hippocampal pyramidal cells

X Li, GA Ascoli - Journal of computational neuroscience, 2006 - Springer
The precise mapping of how complex patterns of synaptic inputs are integrated into specific
patterns of spiking output is an essential step in the characterization of the cellular basis of …