An organism-wide ATAC-seq peak catalog for the bovine and its use to identify regulatory variants
We report the generation of an organism-wide catalog of 976,813 cis-acting regulatory
elements for the bovine detected by the assay for transposase accessible chromatin using …
elements for the bovine detected by the assay for transposase accessible chromatin using …
Open reading frame dominance indicates protein‐coding potential of RNAs
Y Suenaga, M Kato, M Nagai, K Nakatani… - EMBO …, 2022 - embopress.org
Recent studies have identified numerous RNAs with both coding and noncoding functions.
However, the sequence characteristics that determine this bifunctionality remain largely …
However, the sequence characteristics that determine this bifunctionality remain largely …
[HTML][HTML] The contribution of evolutionarily volatile promoters to molecular phenotypes and human trait variation
Background Promoters are sites of transcription initiation that harbour a high concentration
of phenotype-associated genetic variation. The evolutionary gain and loss of promoters …
of phenotype-associated genetic variation. The evolutionary gain and loss of promoters …
Potentially translated sequences determine protein-coding potential of RNAs in cellular organisms
Y Suenaga, M Kato, M Nagai, K Nakatani, H Kogashi… - bioRxiv, 2021 - biorxiv.org
RNA sequence characteristics determine whether their transcripts are coding or noncoding.
Recent studies have shown that, paradoxical to the definition of noncoding RNA, several …
Recent studies have shown that, paradoxical to the definition of noncoding RNA, several …