Information-incorporated Gaussian graphical model for gene expression data

H Yi, Q Zhang, C Lin, S Ma - Biometrics, 2022 - academic.oup.com
In the analysis of gene expression data, network approaches take a system perspective and
have played an irreplaceably important role. Gaussian graphical models (GGMs) have been …

Fuzzy and rough set theory based computational framework for mining genetic interaction triplets from gene expression profiles for lung adenocarcinoma

S Majumder, Y Thakran, V Pal… - IEEE/ACM Transactions …, 2021 - ieeexplore.ieee.org
Genetic interactions are very helpful in understanding different disease and discovering
drugs for it. Compared to the gene pairs that represent the genetic interactions between two …

Hybrid High-Performance Computing Algorithm for Gene Regulatory Network

D Elsayad, S Hamad, HAA Shedeed… - International Journal of …, 2021 - igi-global.com
This paper presents a parallel algorithm for gene regulatory network construction, hereby
referred to as H2pcGRN. The construction of gene regulatory network is a vital methodology …

Parallel computation for sparse network component analysis

D Elsayad, S Hamad, HA Shedeed… - … Conference on Advanced …, 2020 - Springer
The Gene regulatory network analysis is one of the gene expression data analysis tasks.
Gene regulatory network goal is determining the topological order of genes interactions …

Parallel network component analysis technique for gene regulatory network inference

D Elsayad, S Hamad, HA Shedeed… - Concurrency and …, 2021 - Wiley Online Library
The inference of gene regulatory network has a vital role in understanding the topological
order of gene interactions, in addition to how genes are affected by the others genes. One of …

Assisted Network Analysis in Cancer Genomics

H Yi - 2021 - search.proquest.com
Cancer is a molecular disease. In the past two decades, we have witnessed a surge of high-
throughput profiling in cancer research and corresponding development of high …

Hybrid Parallel Computation for Sparse Network Component Analysis

D Elsayad, S Hamad, HA Shedeed… - Proceedings of the …, 2020 - Springer
The gene regulatory network analysis primary goal is understanding the gene interactions
topological order and how the genes influence each other. Network component analysis is a …

Gene regulatory network construction parallel technique based on network component analysis

D Elsayad, S Hamad, HA Shedeed… - Proceedings of the …, 2020 - Springer
Construction of a gene regulatory network is a vital process for understanding the gene
functions and gene influences on the other genes. Furthermore, gene regulatory network …