The microbial rare biosphere: current concepts, methods and ecological principles

F Pascoal, R Costa, C Magalhães - FEMS Microbiology Ecology, 2021 - academic.oup.com
Our ability to describe the highly diverse pool of low abundance populations present in
natural microbial communities is increasing at an unprecedented pace. Yet we currently lack …

Can we use functional annotation of prokaryotic taxa (FAPROTAX) to assign the ecological functions of soil bacteria?

C Sansupa, SFM Wahdan, S Hossen… - Applied Sciences, 2021 - mdpi.com
FAPROTAX is a promising tool for predicting ecological relevant functions of bacterial and
archaeal taxa derived from 16S rRNA amplicon sequencing. The database was initially …

Insight into the function and evolution of the Wood–Ljungdahl pathway in Actinobacteria

JY Jiao, L Fu, ZS Hua, L Liu, N Salam, PF Liu… - The ISME …, 2021 - academic.oup.com
Carbon fixation by chemoautotrophic microbes such as homoacetogens had a major impact
on the transition from the inorganic to the organic world. Recent reports have shown the …

Diversity and distribution of thermophilic microorganisms and their applications in biotechnology

S Arbab, H Ullah, MIU Khan… - Journal of basic …, 2022 - Wiley Online Library
Hot springs ecosystem is the most ancient continuously inhabited ecosystem on earth which
harbors diverse thermophilic bacteria and archaea distributed worldwide. Life in extreme …

植物群落和土壤理化性质对碧塔海湿地土壤细菌群落的影响.

张仲富, 喻庆国, 王行, 刘会会… - Yingyong Shengtai …, 2021 - search.ebscohost.com
摘要土壤微生物是湿地生态系统中土壤⁃ 植物系统生源要素迁移转化的引擎.
探究湿地生态系统地上植物群落, 土壤理化性质和空间结构与土壤细菌间的相互关系是维护湿地 …

Comparative analysis of microbial diversity across temperature gradients in hot springs from Yellowstone and Iceland

PT Podar, Z Yang, SH Björnsdóttir… - Frontiers in Microbiology, 2020 - frontiersin.org
Geothermal hot springs are a natural setting to study microbial adaptation to a wide range of
temperatures reaching up to boiling. Temperature gradients lead to distinct microbial …

Thermophiles and carbohydrate-active enzymes (CAZymes) in biofilm microbial consortia that decompose lignocellulosic plant litters at high temperatures

KJ Liew, CH Liang, YT Lau, AS Yaakop, KG Chan… - Scientific Reports, 2022 - nature.com
The SKY hot spring is a unique site filled with a thick layer of plant litter. With the
advancement of next-generation sequencing, it is now possible to mine many new …

Distinct community assembly processes and habitat specialization driving the biogeographic patterns of abundant and rare bacterioplankton in a brackish coastal …

M Mohapatra, S Manu, JY Kim, G Rastogi - Science of The Total …, 2023 - Elsevier
The ecological diversity patterns and community assembly processes along spatio-temporal
scales are least studied in the bacterioplankton sub-communities of brackish coastal …

Reversed oxidative TCA (roTCA) for carbon fixation by an Acidimicrobiia strain from a saline lake

L Gao, L Liu, AP Lv, L Fu, ZH Lian, T Nunoura… - The ISME …, 2024 - academic.oup.com
Acidimicrobiia are widely distributed in nature and suggested to be autotrophic via the
Calvin–Benson–Bassham (CBB) cycle. However, direct evidence of chemolithoautotrophy in …

Abundant and rare soil fungi exhibit distinct succession patterns in the forefield of Dongkemadi glacier on the central Qinghai-Tibet Plateau

Z Ren, H Gao - Science of the Total Environment, 2022 - Elsevier
Glaciers are retreating rapidly, exposing extensive new soil habitats in glacier forefields and
providing unique areas for studying primary succession. However, understanding the …