[HTML][HTML] Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently

A Currin, N Swainston, PJ Day, DB Kell - Chemical Society Reviews, 2015 - pubs.rsc.org
The amino acid sequence of a protein affects both its structure and its function. Thus, the
ability to modify the sequence, and hence the structure and activity, of individual proteins in …

Cytochromes P450 as versatile biocatalysts

R Bernhardt - Journal of biotechnology, 2006 - Elsevier
Cytochromes P450 are ubiquitously distributed enzymes, which were discovered about 50
years ago and which possess high complexity and display a broad field of activity. They are …

[HTML][HTML] Systematic molecular evolution enables robust biomolecule discovery

EA DeBenedictis, EJ Chory, DW Gretton, B Wang… - Nature …, 2022 - nature.com
Evolution occurs when selective pressures from the environment shape inherited variation
over time. Within the laboratory, evolution is commonly used to engineer proteins and RNA …

Directed evolution of enzymes for industrial biocatalysis

JL Porter, RA Rusli, DL Ollis - ChemBioChem, 2016 - Wiley Online Library
Enzymes have the potential to catalyse a wide variety of chemical reactions. They are
increasingly being sought as environmentally friendly and cost‐effective alternatives to …

Evolving strategies for enzyme engineering

JD Bloom, MM Meyer, P Meinhold, CR Otey… - Current opinion in …, 2005 - Elsevier
Directed evolution is a common technique to engineer enzymes for a diverse set of
applications. Structural information and an understanding of how proteins respond to …

Chemical and biochemical strategies for the randomization of protein encoding DNA sequences: library construction methods for directed evolution

C Neylon - Nucleic acids research, 2004 - academic.oup.com
Directed molecular evolution and combinatorial methodologies are playing an increasingly
important role in the field of protein engineering. The general approach of generating a …

Thermodynamic prediction of protein neutrality

JD Bloom, JJ Silberg, CO Wilke… - Proceedings of the …, 2005 - National Acad Sciences
We present a simple theory that uses thermodynamic parameters to predict the probability
that a protein retains the wild-type structure after one or more random amino acid …

Status of protein engineering for biocatalysts: how to design an industrially useful biocatalyst

AS Bommarius, JK Blum, MJ Abrahamson - Current opinion in chemical …, 2011 - Elsevier
Recent advances in the development of both experimental and computational protein
engineering tools have enabled a number of further successes in the development of …

[HTML][HTML] Recent advances in rational approaches for enzyme engineering

K Steiner, H Schwab - Computational and structural biotechnology journal, 2012 - Elsevier
Enzymes are an attractive alternative in the asymmetric syntheses of chiral building blocks.
To meet the requirements of industrial biotechnology and to introduce new functionalities …

Biocatalysis: a status report

AS Bommarius - Annual review of chemical and biomolecular …, 2015 - annualreviews.org
This review describes the status of the fields of biocatalysts and enzymes, as well as existing
drawbacks, and recent advances in the areas deemed to represent drawbacks. Although …