Global mapping of cancers: The Cancer Genome Atlas and beyond
Cancer genomes have been explored from the early 2000s through massive exome
sequencing efforts, leading to the publication of The Cancer Genome Atlas in 2013 …
sequencing efforts, leading to the publication of The Cancer Genome Atlas in 2013 …
Mutation bias reflects natural selection in Arabidopsis thaliana
Since the first half of the twentieth century, evolutionary theory has been dominated by the
idea that mutations occur randomly with respect to their consequences. Here we test this …
idea that mutations occur randomly with respect to their consequences. Here we test this …
[HTML][HTML] Epigenetic modification impacting brain functions: Effects of physical activity, micronutrients, caffeine, toxins, and addictive substances
R Mallick, AK Duttaroy - Neurochemistry International, 2023 - Elsevier
Abstract Changes in gene expression are involved in many brain functions. Epigenetic
processes modulate gene expression by histone modification and DNA methylation or RNA …
processes modulate gene expression by histone modification and DNA methylation or RNA …
Malignant clonal evolution drives multiple myeloma cellular ecological diversity and microenvironment reprogramming
Y Liang, H He, W Wang, H Wang, S Mo, R Fu, X Liu… - Molecular Cancer, 2022 - Springer
Background Multiple myeloma (MM) is a heterogeneous disease with different patterns of
clonal evolution and a complex tumor microenvironment, representing a challenge for …
clonal evolution and a complex tumor microenvironment, representing a challenge for …
Single-cell methylation analysis of brain tissue prioritizes mutations that alter transcription
Relating genetic variants to behavior remains a fundamental challenge. To assess the utility
of DNA methylation marks in discovering causative variants, we examined their relationship …
of DNA methylation marks in discovering causative variants, we examined their relationship …
De Novo Mutation Rates in Sticklebacks
Mutation rate is a fundamental parameter in population genetics. Apart from being an
important scaling parameter for demographic and phylogenetic inference, it allows one to …
important scaling parameter for demographic and phylogenetic inference, it allows one to …
Association of methylenetetrahydrofolate reductase (MTHFR) rs1801133 (677C> T) gene polymorphism with ischemic stroke risk in different populations: An updated …
L Zhao, T Li, M Dang, Y Li, H Fan, Q Hao, D Song… - Frontiers in …, 2023 - frontiersin.org
Background: Recently, increasing evidence has implicated methylenetetrahydrofolate
reductase (MTHFR) gene mutation as a risk factor for ischemic stroke (IS) in the general …
reductase (MTHFR) gene mutation as a risk factor for ischemic stroke (IS) in the general …
Whole human genome 5'-mC methylation analysis using long read nanopore sequencing
C Silva, M Machado, J Ferrão… - Epigenetics, 2022 - Taylor & Francis
Methylation microarray and bisulphite sequencing are often used to study 5'-methylcytosine
(5'-mC) modification of CpG dinucleotides in the human genome. Although both …
(5'-mC) modification of CpG dinucleotides in the human genome. Although both …
Mutation bias shapes gene evolution in Arabidopsis thaliana
Classical evolutionary theory maintains that mutation rate variation between genes should
be random with respect to fitness–and evolutionary optimization of genic mutation rates …
be random with respect to fitness–and evolutionary optimization of genic mutation rates …
TET1 displays catalytic and non-catalytic functions in the adult mouse cortex
YH Foong, B Caldwell, JL Thorvaldsen, C Krapp… - Epigenetics, 2024 - Taylor & Francis
ABSTRACT TET1/2/3 dioxygenases iteratively demethylate 5-methylcytosine, beginning
with the formation of 5-hydroxymethylcytosine (5hmC). The post-mitotic brain maintains …
with the formation of 5-hydroxymethylcytosine (5hmC). The post-mitotic brain maintains …