Isothermal amplification of nucleic acids

Y Zhao, F Chen, Q Li, L Wang, C Fan - Chemical reviews, 2015 - ACS Publications
Isothermal amplification of nucleic acids is a simple process that rapidly and efficiently
accumulates nucleic acid sequences at constant temperature. Since the early 1990s …

Intratumor heterogeneity in breast cancer

F Beca, K Polyak - Novel biomarkers in the continuum of breast cancer, 2016 - Springer
Intratumor heterogeneity is the main obstacle to effective cancer treatment and personalized
medicine. Both genetic and epigenetic sources of intratumor heterogeneity are well …

Spatial imaging of glycoRNA in single cells with ARPLA

Y Ma, W Guo, Q Mou, X Shao, M Lyu, V Garcia… - Nature …, 2024 - nature.com
Little is known about the biological roles of glycosylated RNAs (glycoRNAs), a recently
discovered class of glycosylated molecules, because of a lack of visualization methods. We …

A combined approach for single-cell mRNA and intracellular protein expression analysis

J Reimegård, M Tarbier, M Danielsson… - Communications …, 2021 - nature.com
Combined measurements of mRNA and protein expression in single cells enable in-depth
analysis of cellular states. We present SPARC, an approach that combines single-cell RNA …

Highly multiplexed simultaneous detection of RNAs and proteins in single cells

AP Frei, FA Bava, ER Zunder, EWY Hsieh, SY Chen… - Nature …, 2016 - nature.com
To enable the detection of expression signatures specific to individual cells, we developed
PLAYR (proximity ligation assay for RNA), a method for highly multiplexed transcript …

Single cell–resolution western blotting

CC Kang, KA Yamauchi, J Vlassakis, E Sinkala… - Nature protocols, 2016 - nature.com
This protocol describes how to perform western blotting on individual cells to measure cell-to-
cell variation in protein expression levels and protein state. Like conventional western …

Direct visualization of single-nucleotide variation in mtDNA using a CRISPR/Cas9-mediated proximity ligation assay

K Zhang, R Deng, X Teng, Y Li, Y Sun… - Journal of the …, 2018 - ACS Publications
The accumulation of mitochondrial DNA (mtDNA) mutations in cells is strongly related to
aging-associated diseases. Imaging of single-nucleotide variation (SNV) in mtDNA is crucial …

Rolling circle amplification in integrated microsystems: An uncut gem toward massively multiplexed pathogen diagnostics and genotyping

RRG Soares, N Madaboosi… - Accounts of Chemical …, 2021 - ACS Publications
Conspectus The development of robust methods allowing the precise detection of specific
nucleic acid sequences is of major societal relevance, paving the way for significant …

Automated cell-type classification in intact tissues by single-cell molecular profiling

M Nagendran, DP Riordan, PB Harbury, TJ Desai - Elife, 2018 - elifesciences.org
A major challenge in biology is identifying distinct cell classes and mapping their
interactions in vivo. Tissue-dissociative technologies enable deep single cell molecular …

Rolling circle amplification for single cell analysis and in situ sequencing

H Gao, K Zhang, X Teng, J Li - TrAC Trends in Analytical Chemistry, 2019 - Elsevier
Single cell analysis is of great significance to biological and biomedical research. With
recent development, lots of in situ amplification methods have been applied for imaging the …