Strategies for sample labelling and library preparation in DNA metabarcoding studies

K Bohmann, V Elbrecht, C Carøe, I Bista… - Molecular Ecology …, 2022 - Wiley Online Library
Metabarcoding of DNA extracted from environmental or bulk specimen samples is
increasingly used to profile biota in basic and applied biodiversity research because of its …

Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance

AM Piper, J Batovska, NOI Cogan, J Weiss… - …, 2019 - academic.oup.com
Trap-based surveillance strategies are widely used for monitoring of invasive insect species,
aiming to detect newly arrived exotic taxa as well as track the population levels of …

Biases in bulk: DNA metabarcoding of marine communities and the methodology involved

LM van der Loos, R Nijland - Molecular Ecology, 2021 - Wiley Online Library
With the growing anthropogenic pressure on marine ecosystems, the need for efficient
monitoring of biodiversity grows stronger. DNA metabarcoding of bulk samples is …

Validation of COI metabarcoding primers for terrestrial arthropods

V Elbrecht, TWA Braukmann, NV Ivanova, SWJ Prosser… - PeerJ, 2019 - peerj.com
Metabarcoding can rapidly determine the species composition of bulk samples and thus
aids biodiversity and ecosystem assessment. However, it is essential to use primer sets that …

A practical guide to DNA metabarcoding for entomological ecologists

M Liu, LJ Clarke, SC Baker, GJ Jordan… - Ecological …, 2020 - Wiley Online Library
1. DNA metabarcoding is a cost‐effective species identification approach with great potential
to assist entomological ecologists. This review presents a practical guide to help …

Calibrating environmental DNA metabarcoding to conventional surveys for measuring fish species richness

ME McElroy, TL Dressler, GC Titcomb… - Frontiers in Ecology …, 2020 - frontiersin.org
The ability to properly identify species present in a landscape is foundational to ecology and
essential for natural resource management and conservation. However, many species are …

Environmental RNA as a tool for marine community biodiversity assessments

MS Giroux, JR Reichman, T Langknecht… - Scientific Reports, 2022 - nature.com
Microscopic organisms are often overlooked in traditional diversity assessments due to the
difficulty of identifying them based on morphology. Metabarcoding is a method for rapidly …

Metabarcoding as a quantitative tool for estimating biodiversity and relative biomass of marine zooplankton

EA Ershova, OS Wangensteen… - ICES Journal of …, 2021 - academic.oup.com
Although metabarcoding is a well-established tool for describing diversity of pelagic
communities, its quantitative value is still controversial, with poor correlations previously …

Harnessing the power of eDNA metabarcoding for the detection of deep-sea fishes

B McClenaghan, N Fahner, D Cote, J Chawarski… - PloS one, 2020 - journals.plos.org
The deep ocean is the largest biome on Earth and faces increasing anthropogenic
pressures from climate change and commercial fisheries. Our ability to sustainably manage …

[HTML][HTML] Patterns and drivers of macroalgal 'blue carbon'transport and deposition in near-shore coastal environments

A Bellgrove, PI Macreadie, MA Young… - Science of the Total …, 2023 - Elsevier
The role of macroalgae (seaweed) as a global contributor to carbon drawdown within
marine sediments–termed 'blue carbon'–remains uncertain and controversial. While studies …