Ribosome profiling reveals the what, when, where and how of protein synthesis
GA Brar, JS Weissman - Nature reviews Molecular cell biology, 2015 - nature.com
Ribosome profiling, which involves the deep sequencing of ribosome-protected mRNA
fragments, is a powerful tool for globally monitoring translation in vivo. The method has …
fragments, is a powerful tool for globally monitoring translation in vivo. The method has …
Ageing exacerbates ribosome pausing to disrupt cotranslational proteostasis
KC Stein, F Morales-Polanco, J van der Lienden… - Nature, 2022 - nature.com
Ageing is accompanied by a decline in cellular proteostasis, which underlies many age-
related protein misfolding diseases,. Yet, how ageing impairs proteostasis remains unclear …
related protein misfolding diseases,. Yet, how ageing impairs proteostasis remains unclear …
[PDF][PDF] ZNF598 is a quality control sensor of collided ribosomes
Aberrantly slow translation elicits quality control pathways initiated by the ubiquitin ligase
ZNF598. How ZNF598 discriminates physiologic from pathologic translation complexes and …
ZNF598. How ZNF598 discriminates physiologic from pathologic translation complexes and …
[PDF][PDF] The ASC-1 complex disassembles collided ribosomes
S Juszkiewicz, SH Speldewinde, L Wan, JQ Svejstrup… - Molecular cell, 2020 - cell.com
Translating ribosomes that slow excessively incur collisions with trailing ribosomes.
Persistent collisions are detected by ZNF598, a ubiquitin ligase that ubiquitinates sites on …
Persistent collisions are detected by ZNF598, a ubiquitin ligase that ubiquitinates sites on …
[PDF][PDF] Ribosome footprint profiling of translation throughout the genome
NT Ingolia - Cell, 2016 - cell.com
Ribosome profiling has emerged as a technique for measuring translation comprehensively
and quantitatively by deep sequencing of ribosome-protected mRNA fragments. By …
and quantitatively by deep sequencing of ribosome-protected mRNA fragments. By …
[PDF][PDF] Disome and trisome profiling reveal genome-wide targets of ribosome quality control
S Meydan, NR Guydosh - Molecular cell, 2020 - cell.com
The ribosome-associated protein quality control (RQC) system that resolves stalled
translation events is activated when ribosomes collide and form disome, trisome, or higher …
translation events is activated when ribosomes collide and form disome, trisome, or higher …
[HTML][HTML] Ribosome profiling reveals pervasive translation outside of annotated protein-coding genes
Ribosome profiling suggests that ribosomes occupy many regions of the transcriptome
thought to be noncoding, including 5′ UTRs and long noncoding RNAs (lncRNAs) …
thought to be noncoding, including 5′ UTRs and long noncoding RNAs (lncRNAs) …
Ribosome-associated protein quality control
O Brandman, RS Hegde - Nature structural & molecular biology, 2016 - nature.com
Protein synthesis by the ribosome can fail for numerous reasons including faulty mRNA,
insufficient availability of charged tRNAs and genetic errors. All organisms have evolved …
insufficient availability of charged tRNAs and genetic errors. All organisms have evolved …
Roadblocks and resolutions in eukaryotic translation
AP Schuller, R Green - Nature Reviews Molecular Cell Biology, 2018 - nature.com
During protein synthesis, ribosomes encounter many roadblocks, the outcomes of which are
largely determined by substrate availability, amino acid features and reaction kinetics …
largely determined by substrate availability, amino acid features and reaction kinetics …