TET-mediated active DNA demethylation: mechanism, function and beyond
In mammals, DNA methylation in the form of 5-methylcytosine (5mC) can be actively
reversed to unmodified cytosine (C) through TET dioxygenase-mediated oxidation of 5mC to …
reversed to unmodified cytosine (C) through TET dioxygenase-mediated oxidation of 5mC to …
Detecting RNA modifications in the epitranscriptome: predict and validate
RNA modifications are emerging players in the field of post-transcriptional regulation of
gene expression, and are attracting a comparable degree of research interest to DNA and …
gene expression, and are attracting a comparable degree of research interest to DNA and …
Mapping the epigenetic modifications of DNA and RNA
Over 17 and 160 types of chemical modifications have been identified in DNA and RNA,
respectively. The interest in understanding the various biological functions of DNA and RNA …
respectively. The interest in understanding the various biological functions of DNA and RNA …
Mapping epigenetic modifications by sequencing technologies
The “epigenetics” concept was first described in 1942. Thus far, chemical modifications on
histones, DNA, and RNA have emerged as three important building blocks of epigenetic …
histones, DNA, and RNA have emerged as three important building blocks of epigenetic …
Latest techniques to study DNA methylation
Q Gouil, A Keniry - Essays in biochemistry, 2019 - portlandpress.com
Bisulfite sequencing is a powerful technique to detect 5-methylcytosine in DNA that has
immensely contributed to our understanding of epigenetic regulation in plants and animals …
immensely contributed to our understanding of epigenetic regulation in plants and animals …
5-Formylcytosine can be a stable DNA modification in mammals
M Bachman, S Uribe-Lewis, X Yang… - Nature chemical …, 2015 - nature.com
Formylcytosine (5fC) is a rare base found in mammalian DNA and thought to be involved in
active DNA demethylation. Here, we show that developmental dynamics of 5fC levels in …
active DNA demethylation. Here, we show that developmental dynamics of 5fC levels in …
Advances in the profiling of DNA modifications: cytosine methylation and beyond
Chemical modifications of DNA have been recognized as key epigenetic mechanisms for
maintenance of the cellular state and memory. Such DNA modifications include canonical 5 …
maintenance of the cellular state and memory. Such DNA modifications include canonical 5 …
TET proteins and the control of cytosine demethylation in cancer
L Scourzic, E Mouly, OA Bernard - Genome medicine, 2015 - Springer
The discovery that ten-eleven translocation (TET) proteins are α-ketoglutarate-dependent
dioxygenases involved in the conversion of 5-methylcytosines (5-mC) to 5 …
dioxygenases involved in the conversion of 5-methylcytosines (5-mC) to 5 …
Deficient methylation and formylation of mt-tRNAMet wobble cytosine in a patient carrying mutations in NSUN3
L Van Haute, S Dietmann, L Kremer, S Hussain… - Nature …, 2016 - nature.com
Epitranscriptome modifications are required for structure and function of RNA and defects in
these pathways have been associated with human disease. Here we identify the RNA target …
these pathways have been associated with human disease. Here we identify the RNA target …
MethylC-seq library preparation for base-resolution whole-genome bisulfite sequencing
Current high-throughput DNA sequencing technologies enable acquisition of billions of data
points through which myriad biological processes can be interrogated, including genetic …
points through which myriad biological processes can be interrogated, including genetic …