The impact of transposable elements in adaptive evolution
L Schrader, J Schmitz - Molecular Ecology, 2019 - Wiley Online Library
The growing knowledge about the influence of transposable elements (TE s) on (a) long‐
term genome and transcriptome evolution;(b) genomic, transcriptomic and epigenetic …
term genome and transcriptome evolution;(b) genomic, transcriptomic and epigenetic …
Integrating networks, phylogenomics, and population genomics for the study of polyploidy
Duplication events are regarded as sources of evolutionary novelty, but our understanding
of general trends for the long-term trajectory of additional genomic material is still lacking …
of general trends for the long-term trajectory of additional genomic material is still lacking …
The evolution of transposable elements in Brachypodium distachyon is governed by purifying selection, while neutral and adaptive processes play a minor role
Understanding how plants adapt to changing environments and the potential contribution of
transposable elements (TEs) to this process is a key question in evolutionary genomics …
transposable elements (TEs) to this process is a key question in evolutionary genomics …
Environmental response in gene expression and DNA methylation reveals factors influencing the adaptive potential of Arabidopsis lyrata
Understanding what factors influence plastic and genetic variation is valuable for predicting
how organisms respond to changes in the selective environment. Here, using gene …
how organisms respond to changes in the selective environment. Here, using gene …
Off-target piRNA gene silencing in Drosophila melanogaster rescued by a transposable element insertion
DE Miller, AP Dorador, K Van Vaerenberghe, A Li… - PLoS …, 2023 - journals.plos.org
Transposable elements (TE) are selfish genetic elements that can cause harmful mutations.
In Drosophila, it has been estimated that half of all spontaneous visible marker phenotypes …
In Drosophila, it has been estimated that half of all spontaneous visible marker phenotypes …
Transposable Elements Are Important Contributors to Standing Variation in Gene Expression in Capsella Grandiflora
J Uzunović, EB Josephs… - … biology and evolution, 2019 - academic.oup.com
Transposable elements (TEs) make up a significant portion of eukaryotic genomes and are
important drivers of genome evolution. However, the extent to which TEs affect gene …
important drivers of genome evolution. However, the extent to which TEs affect gene …
Constant conflict between Gypsy LTR retrotransposons and CHH methylation within a stress‐adapted mangrove genome
Y Wang, W Liang, T Tang - New Phytologist, 2018 - Wiley Online Library
The evolutionary dynamics of the conflict between transposable elements (TE s) and their
host genome remain elusive. This conflict will be intense in stress‐adapted plants as stress …
host genome remain elusive. This conflict will be intense in stress‐adapted plants as stress …
[PDF][PDF] Population genomics of transitions to selfing in Brassicaceae model systems
TM Mattila, B Laenen, T Slotte - Statistical population genomics, 2020 - library.oapen.org
Many plants harbor complex mechanisms that promote outcrossing and efficient pollen
transfer. These include floral adaptations as well as genetic mechanisms, such as molecular …
transfer. These include floral adaptations as well as genetic mechanisms, such as molecular …
Epigenetic targeting of transposon relics: beating the dead horses of the genome?
I Sammarco, J Pieters, S Salony, I Toman… - Epigenetics, 2022 - Taylor & Francis
Transposable elements (TEs) have been seen as selfish genetic elements that can
propagate in a host genome. Their propagation success is however hindered by a …
propagate in a host genome. Their propagation success is however hindered by a …
Controlling for variable transposition rate with an age-adjusted site frequency spectrum
Recognition of the important role of transposable elements (TEs) in eukaryotic genomes
quickly led to a burgeoning literature modeling and estimating the effects of selection on …
quickly led to a burgeoning literature modeling and estimating the effects of selection on …