SpikeInterface, a unified framework for spike sorting
AP Buccino, CL Hurwitz, S Garcia, J Magland… - Elife, 2020 - elifesciences.org
Much development has been directed toward improving the performance and automation of
spike sorting. This continuous development, while essential, has contributed to an over …
spike sorting. This continuous development, while essential, has contributed to an over …
Data management strategy for a collaborative research center
The importance of effective research data management (RDM) strategies to support the
generation of Findable, Accessible, Interoperable, and Reusable (FAIR) neuroscience data …
generation of Findable, Accessible, Interoperable, and Reusable (FAIR) neuroscience data …
[HTML][HTML] Combining hypothesis-and data-driven neuroscience modeling in FAIR workflows
Modeling in neuroscience occurs at the intersection of different points of view and
approaches. Typically, hypothesis-driven modeling brings a question into focus so that a …
approaches. Typically, hypothesis-driven modeling brings a question into focus so that a …
[HTML][HTML] Dataset of human medial temporal lobe neurons, scalp and intracranial EEG during a verbal working memory task
E Boran, T Fedele, A Steiner, P Hilfiker, L Stieglitz… - Scientific data, 2020 - nature.com
We present an electrophysiological dataset recorded from nine subjects during a verbal
working memory task. Subjects were epilepsy patients undergoing intracranial monitoring …
working memory task. Subjects were epilepsy patients undergoing intracranial monitoring …
[HTML][HTML] Handling metadata in a neurophysiology laboratory
To date, non-reproducibility of neurophysiological research is a matter of intense discussion
in the scientific community. A crucial component to enhance reproducibility is to …
in the scientific community. A crucial component to enhance reproducibility is to …
[HTML][HTML] PyDapsys: an open-source library for accessing electrophysiology data recorded with DAPSYS
P Konradi, A Troglio, A Pérez Garriga… - Frontiers in …, 2023 - frontiersin.org
In the field of neuroscience, a considerable number of commercial data acquisition and
processing solutions rely on proprietary formats for data storage. This often leads to data …
processing solutions rely on proprietary formats for data storage. This often leads to data …
[HTML][HTML] Neurophysiological recordings from parietal areas of macaque brain during an instructed-delay reaching task
Facilitating data sharing in scientific research, especially in the domain of animal studies,
holds immense value, particularly in mitigating distress and enhancing the efficiency of data …
holds immense value, particularly in mitigating distress and enhancing the efficiency of data …
[HTML][HTML] odMLtables: a user-friendly approach for managing metadata of neurophysiological experiments
J Sprenger, L Zehl, J Pick, M Sonntag… - Frontiers in …, 2019 - frontiersin.org
An essential aspect of scientific reproducibility is a coherent and complete acquisition of
metadata along with the actual data of an experiment. The high degree of complexity and …
metadata along with the actual data of an experiment. The high degree of complexity and …
[HTML][HTML] Electrophysiological dataset from macaque visual cortical area MST in response to a novel motion stimulus
B Wild, A Maamoun, Y Mayr, R Brockhausen, S Treue - Scientific Data, 2022 - nature.com
Establishing the cortical neural representation of visual stimuli is a central challenge of
systems neuroscience. Publicly available data would allow a broad range of scientific …
systems neuroscience. Publicly available data would allow a broad range of scientific …
[HTML][HTML] Experimental directory structure (Exdir): an alternative to HDF5 without introducing a new file format
SA Dragly, M Hobbi Mobarhan… - Frontiers in …, 2018 - frontiersin.org
Natural sciences generate an increasing amount of data in a wide range of formats
developed by different research groups and commercial companies. At the same time there …
developed by different research groups and commercial companies. At the same time there …