Encapsulins—Bacterial protein nanocompartments: Structure, properties, and application

AN Gabashvili, NS Chmelyuk, MV Efremova… - Biomolecules, 2020 - mdpi.com
Recently, a new class of prokaryotic compartments, collectively called encapsulins or protein
nanocompartments, has been discovered. The shell proteins of these structures self …

Encapsulins: molecular biology of the shell

RJ Nichols, C Cassidy-Amstutz… - Critical Reviews in …, 2017 - Taylor & Francis
Compartmentalization is both a fundamental principle of cellular organization and an
emerging theme in prokaryotic biology. Work in the past few decades has shown that protein …

The crystal structure of a virus-like particle from the hyperthermophilic archaeon Pyrococcus furiosus provides insight into the evolution of viruses

F Akita, KT Chong, H Tanaka, E Yamashita… - Journal of molecular …, 2007 - Elsevier
Pyrococcus furiosus is a hyperthermophilic archaeal microorganism found near deep-sea
thermal vents and its optimal growth temperature of 100° C. Recently, a 38.8-kDa protein …

[HTML][HTML] Virus-like vesicles and extracellular DNA produced by hyperthermophilic archaea of the order Thermococcales

N Soler, E Marguet, JM Verbavatz, P Forterre - Research in Microbiology, 2008 - Elsevier
Cultures of hyperthermophilic archaea (order Thermococcales) have been analyzed by
electron microscopy and epifluorescence staining for the presence of virus-like particles. We …

Packaging guest proteins into the encapsulin nanocompartment from Rhodococcus erythropolis N771

A Tamura, Y Fukutani, T Takami, M Fujii… - Biotechnology and …, 2015 - Wiley Online Library
The encapsulin nanocompartment from Rhodococcus erythropolis N771 (Reencapsulin)
was expressed and purified in wild‐type and C‐terminally His‐tagged forms. Negative …

Building spatial synthetic biology with compartments, scaffolds, and communities

JK Polka, SG Hays, PA Silver - Cold Spring Harbor …, 2016 - cshperspectives.cshlp.org
Traditional views of synthetic biology often treat the cell as an unstructured container in
which biological reactions proceed uniformly. In reality, the organization of biological …

Encapsulins: structure, properties, and biotechnological applications

NS Chmelyuk, VV Oda, AN Gabashvili… - Biochemistry …, 2023 - Springer
In 1994 a new class of prokaryotic compartments was discovered, collectively called
“encapsulins” or “nanocompartments”. Encapsulin shell protomer proteins self-assemble to …

Genome sequencing of a genetically tractable Pyrococcus furiosus strain reveals a highly dynamic genome

SL Bridger, WA Lancaster, FL Poole… - Journal of …, 2012 - Am Soc Microbiol
The model archaeon Pyrococcus furiosus grows optimally near 100° C on carbohydrates
and peptides. Its genome sequence (NCBI) was determined 12 years ago. A genetically …

Functional domains of the HK97 capsid maturation protease and the mechanisms of protein encapsidation

RL Duda, B Oh, RW Hendrix - Journal of molecular biology, 2013 - Elsevier
Tailed double-stranded DNA bacteriophages and herpesviruses build capsids by co-
assembling a major capsid protein with an internal scaffolding protein that then exits from …

[HTML][HTML] Fossil record of an archaeal HK97-like provirus

J Heinemann, WS Maaty, GH Gauss, N Akkaladevi… - Virology, 2011 - Elsevier
One of the outstanding questions in biology today is the origin of viruses. We have
discovered a protein in the hyperthermophile Sulfolobus solfataricus while following …