Origins of specificity in protein-DNA recognition

R Rohs, X Jin, SM West, R Joshi… - Annual review of …, 2010 - annualreviews.org
Specific interactions between proteins and DNA are fundamental to many biological
processes. In this review, we provide a revised view of protein-DNA interactions that …

The evolution of transcriptional regulation in eukaryotes

GA Wray, MW Hahn, E Abouheif… - Molecular biology …, 2003 - academic.oup.com
Gene expression is central to the genotype-phenotype relationship in all organisms, and it is
an important component of the genetic basis for evolutionary change in diverse aspects of …

[HTML][HTML] Molecular topography of an entire nervous system

SR Taylor, G Santpere, A Weinreb, A Barrett, MB Reilly… - Cell, 2021 - cell.com
We have produced gene expression profiles of all 302 neurons of the C. elegans nervous
system that match the single-cell resolution of its anatomy and wiring diagram. Our results …

[HTML][HTML] Cofactor binding evokes latent differences in DNA binding specificity between Hox proteins

M Slattery, T Riley, P Liu, N Abe, P Gomez-Alcala… - Cell, 2011 - cell.com
Members of transcription factor families typically have similar DNA binding specificities yet
execute unique functions in vivo. Transcription factors often bind DNA as multiprotein …

MyoD and the transcriptional control of myogenesis

CA Berkes, SJ Tapscott - Seminars in cell & developmental biology, 2005 - Elsevier
The basic helix-loop-helix myogenic regulatory factors MyoD, Myf5, myogenin and MRF4
have critical roles in skeletal muscle development. Together with the Mef2 proteins and E …

Pax-6, a murine paired box gene, is expressed in the developing CNS

C Walther, P Gruss - Development, 1991 - journals.biologists.com
ABSTRACT A multigene family of paired-box-containing genes (Pax genes) has been
identified in the mouse. In this report, we describe the expression pattern of Pax-6 during …

Homeodomain proteins

WJ Gehring, M Affolter, T Bürglin - Annual review of biochemistry, 1994 - annualreviews.org
Homeotic genes are master control genes that specify the body plan and regulate
development of higher organisms. They share a common sequence element of 180 bp, the …

[HTML][HTML] Crx, a novel otx-like homeobox gene, shows photoreceptor-specific expression and regulates photoreceptor differentiation

T Furukawa, EM Morrow, CL Cepko - Cell, 1997 - cell.com
We have isolated a novel otx-like homeobox gene, Crx, from the mouse retina. Crx
expression is restricted to developing and mature photoreceptor cells. CRX bound and …

[HTML][HTML] Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences

MF Berger, G Badis, AR Gehrke, S Talukder… - Cell, 2008 - cell.com
Most homeodomains are unique within a genome, yet many are highly conserved across
vast evolutionary distances, implying strong selection on their precise DNA-binding …

Homeodomain-DNA recognition

WJ Gehring, YQ Qian, M Billeter… - Cell, 1994 - Elsevier
Homeodomain-DNA Recognition Review Page 1 Cell, Vol. 79, 211-223, July 29, 1994, Copyright
0 1994 by Cell Press Homeodomain-DNA Recognition Review Waiter J. Gehring; Yan Giu …