Modeling the toxicity of pollutants mixtures for risk assessment: a review

M Sigurnjak Bureš, M Cvetnić, M Miloloža… - Environmental chemistry …, 2021 - Springer
The occurrence of contaminants in natural waters is a potential threat to the environment.
Since contaminants are commonly present as mixtures, numerous interactions may occur …

Automatic construction of molecular similarity networks for visual graph mining in chemical space of bioactive peptides: an unsupervised learning approach

L Aguilera-Mendoza, Y Marrero-Ponce… - Scientific reports, 2020 - nature.com
The increasing interest in bioactive peptides with therapeutic potentials has been reflected
in a large variety of biological databases published over the last years. However, the …

[PDF][PDF] Augmented Zagreb index: extremal results and bounds

A Ali, B Furtula, I Gutman, D Vukičević - MATCH Communications in …, 2021 - scidar.kg.ac.rs
Augmented Zagreb Index: Extremal Results and Bounds Page 1 Augmented Zagreb Index:
Extremal Results and Bounds Akbar Ali1,2, Boris Furtula3, Ivan Gutman3, Damir Vukicevic4 …

IFPTML mapping of drug graphs with protein and chromosome structural networks vs. Pre-clinical assay information for discovery of Antimalarial compounds

V Quevedo-Tumailli, B Ortega-Tenezaca… - International journal of …, 2021 - mdpi.com
The parasite species of genus Plasmodium causes Malaria, which remains a major global
health problem due to parasite resistance to available Antimalarial drugs and increasing …

Graph Energy Variants and Topological Indices in Platinum Anticancer Drug Design: Mathematical Insights and Computational Analysis with DFT and QTAIM

S Wazzan, NU Ozalan - Journal of Mathematics, 2023 - Wiley Online Library
In this paper, we present a new approach that explores the application of graph energy
variants in chemistry, specifically in the development of platinum anticancer drugs. While …

Ensemble learning application to discover new trypanothione synthetase inhibitors

JI Alice, CL Bellera, D Benítez, MA Comini… - Molecular Diversity, 2021 - Springer
Trypanosomatid-caused diseases are among the neglected infectious diseases with the
highest disease burden, affecting about 27 million people worldwide and, in particular, socio …

PeptiDesCalculator: software for computation of peptide descriptors. Definition, implementation and case studies for 9 bioactivity endpoints

SJ Barigye, S Gómez‐Ganau… - Proteins: Structure …, 2021 - Wiley Online Library
We present a novel Java‐based program denominated PeptiDesCalculator for computing
peptide descriptors. These descriptors include: redefinitions of known protein parameters to …

[HTML][HTML] QSAR predictions on antichagas fenarimols

PR Duchowicz, SE Fioressi, DE Bacelo - Results in Chemistry, 2022 - Elsevier
A useful QSAR model was developed to predict the antichagas activity for 760 fenarimol
analogues obtained from the ChEMBL database, which are considered as very active and …

On the first two extremum Zagreb indices and coindices of chemical trees

Z Du, A Ali, R Rafee, Z Raza… - International Journal of …, 2021 - Wiley Online Library
The first and second Zagreb indices are the molecular descriptors that were appeared within
a study of molecular modeling more than four decades ago. The coindex versions of these …

Exploring proteasome inhibition using atomic weighted vector indices and machine learning approaches

Y Martínez-López, JA Castillo-Garit… - Molecular Diversity, 2023 - Springer
Ubiquitin–proteasome system (UPS) is a highly regulated mechanism of intracellular protein
degradation and turnover. The UPS is involved in different biological activities, such as the …