NMR approaches for structural analysis of multidomain proteins and complexes in solution

C Göbl, T Madl, B Simon, M Sattler - Progress in Nuclear Magnetic …, 2014 - Elsevier
NMR spectroscopy is a key method for studying the structure and dynamics of (large)
multidomain proteins and complexes in solution. It plays a unique role in integrated …

NMR studies of dynamic biomolecular conformational ensembles

DA Torchia - Progress in nuclear magnetic resonance spectroscopy, 2015 - Elsevier
Multidimensional heteronuclear NMR approaches can provide nearly complete sequential
signal assignments of isotopically enriched biomolecules. The availability of assignments …

Interdomain dynamics explored by paramagnetic NMR

L Russo, M Maestre-Martinez, S Wolff… - Journal of the …, 2013 - ACS Publications
An ensemble-based approach is presented to explore the conformational space sampled by
a multidomain protein showing moderate interdomain dynamics in terms of translational and …

Examination of matrix metalloproteinase-1 in solution: a preference for the pre-collagenolysis state

L Cerofolini, GB Fields, M Fragai… - Journal of Biological …, 2013 - ASBMB
Catalysis of collagen degradation by matrix metalloproteinase 1 (MMP-1) has been
proposed to critically rely on flexibility between the catalytic (CAT) and hemopexin-like …

Protein assembly and building blocks: beyond the limits of the LEGO brick metaphor

Y Levy - Biochemistry, 2017 - ACS Publications
Proteins, like other biomolecules, have a modular and hierarchical structure. Various
building blocks are used to construct proteins of high structural complexity and diverse …

Insights into domain–domain motions in proteins and RNA from solution NMR

E Ravera, L Salmon, M Fragai, G Parigi… - Accounts of chemical …, 2014 - ACS Publications
Conspectus Many multidomain proteins and ribonucleic acids consist of domains that
autonomously fold and that are linked together by flexible junctions. This architectural …

Folding of multidomain proteins: Biophysical consequences of tethering even in apparently independent folding

O Arviv, Y Levy - Proteins: Structure, Function, and …, 2012 - Wiley Online Library
Most eukaryotic and a substantial fraction of prokaryotic proteins are composed of more than
one domain. The tethering of these evolutionary, structural, and functional units raises …

Investigating protein conformational energy landscapes and atomic resolution dynamics from NMR dipolar couplings: a review

L Salmon, M Blackledge - Reports on Progress in Physics, 2015 - iopscience.iop.org
Nuclear magnetic resonance spectroscopy is exquisitely sensitive to protein dynamics. In
particular inter-nuclear dipolar couplings, that become measurable in solution when the …

Determination of the Individual Roles of the Linker Residues in the Inter-Domain Motions of Calmodulin using NMR Chemical Shifts

P Kukic, C Camilloni, A Cavalli, M Vendruscolo - Biophysical Journal, 2014 - cell.com
Many protein molecules are formed by two or more domains whose structures and dynamics
are closely related to their biological functions. It is challenging, however, to determine the …

Model of a six immunoglobulin-like domain fragment of filamin A (16–21) built using residual dipolar couplings

H Tossavainen, O Koskela, P Jiang… - Journal of the …, 2012 - ACS Publications
Filamins are actin-binding proteins that participate in a wide range of cell functions,
including cell morphology, locomotion, membrane protein localization, and intracellular …