Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications

M Su, T Pan, QZ Chen, WW Zhou, Y Gong, G Xu… - Military Medical …, 2022 - Springer
The application of single-cell RNA sequencing (scRNA-seq) in biomedical research has
advanced our understanding of the pathogenesis of disease and provided valuable insights …

PGAM1 inhibition promotes HCC ferroptosis and synergizes with anti‐PD‐1 immunotherapy

Y Zheng, Y Wang, Z Lu, J Wan, L Jiang… - Advanced …, 2023 - Wiley Online Library
The combination of immunotherapy and molecular targeted therapy exhibits promising
therapeutic efficacy in hepatocellular carcinoma (HCC), but the underlying mechanism is still …

[HTML][HTML] Identification and validation of a prognostic risk-scoring model based on sphingolipid metabolism-associated cluster in colon adenocarcinoma

Q Yuan, W Zhang, W Shang - Frontiers in Endocrinology, 2022 - frontiersin.org
Colon adenocarcinoma (COAD) is the primary factor responsible for cancer-related
mortalities in western countries, and its development and progression are affected by altered …

High FLT3 expression indicates favorable prognosis and correlates with clinicopathological parameters and immune infiltration in breast cancer

R Chen, X Wang, J Fu, M Liang, T Xia - Frontiers in Genetics, 2022 - frontiersin.org
Purpose: Breast cancer is a highly heterogeneous malignancy, seriously threatening female
health worldwide and inducing higher mortalities. Few have the studies evaluated Fms-like …

Identification of disulfidptosis-related subtypes, characterization of tumor microenvironment infiltration, and development of a prognosis model in breast cancer

J Liang, X Wang, J Yang, P Sun, J Sun… - Frontiers in …, 2023 - frontiersin.org
Introduction Breast cancer (BC) is now the most common type of cancer in women.
Disulfidptosis is a new regulation of cell death (RCD). RCD dysregulation is causally linked …

[HTML][HTML] N7-methylguanosine regulatory genes well represented by METTL1 define vastly different prognostic, immune and therapy landscapes in adrenocortical …

F Xu, D Cai, S Liu, K He, J Chen, L Qu… - American Journal of …, 2023 - ncbi.nlm.nih.gov
Abstract Although N7-methylguanosine (m7G) is one of the most frequent RNA
modifications, it has received little attention. Adrenocortical carcinoma (ACC) is a highly …

Comprehensive analysis of cuproptosis-related genes in immune infiltration and prognosis in lung adenocarcinoma

X Xiaona, Q Liu, X Zhou, R Liang, S Yang, M Xu… - Computers in Biology …, 2023 - Elsevier
Copper-dependent cell death, called cuproptosis, is connected to tumor development,
prognosis, and the immune response. Nevertheless, the function of cuproptosis-related …

Cuprotosis clusters predict prognosis and immunotherapy response in low-grade glioma

W Zhu, Z Chen, M Fu, Q Li, X Chen, X Li, N Luo… - Apoptosis, 2024 - Springer
Cuprotosis, an emerging mode of cell death, has recently caught the attention of researchers
worldwide. However, its impact on low-grade glioma (LGG) patients has not been fully …

Pan‐cancer analyses reveal that increased Hedgehog activity correlates with tumor immunosuppression and resistance to immune checkpoint inhibitors

J Jiang, Y Ding, Y Chen, J Lu, Y Chen, G Wu… - Cancer …, 2022 - Wiley Online Library
Abstract Background Immune checkpoint inhibitors (ICIs) have shown numerous clinical
benefits in multiple cancer types, but good predictive biomarkers are severely lacking …

Identification of a chemoresistance-related prognostic gene signature by comprehensive analysis and experimental validation in pancreatic cancer

J Chen, Z Liu, Z Wu, W Li, X Tan - Frontiers in Oncology, 2023 - frontiersin.org
Background Chemoresistance is a major hurdle to improving the prognosis of pancreatic
cancer (PC). This study aimed to identify key genes regulating chemoresistance and …