DNMT3A in haematological malignancies

L Yang, R Rau, MA Goodell - Nature Reviews Cancer, 2015 - nature.com
DNA methylation patterns are disrupted in various malignancies, suggesting a role in the
development of cancer, but genetic aberrations directly linking the DNA methylation …

Phenotypic plasticity and the epigenetics of human disease

AP Feinberg - Nature, 2007 - nature.com
It is becoming clear that epigenetic changes are involved in human disease as well as
during normal development. A unifying theme of disease epigenetics is defects in …

Genetic association studies: design, analysis and interpretation

CM Lewis - Briefings in bioinformatics, 2002 - academic.oup.com
This paper provides a review of the design and analysis of genetic association studies. In
case control studies, the different contingency tables and their relationships to the …

Promoter CpG methylation contributes to ES cell gene regulation in parallel with Oct4/Nanog, PcG complex, and histone H3 K4/K27 trimethylation

SD Fouse, Y Shen, M Pellegrini, S Cole, A Meissner… - Cell stem cell, 2008 - cell.com
We report here genome-wide mapping of DNA methylation patterns at proximal promoter
regions in mouse embryonic stem (mES) cells. Most methylated genes are differentiation …

The role of PI3K/AKT, MAPK/ERK and NFκβ signalling in the maintenance of human embryonic stem cell pluripotency and viability highlighted by transcriptional …

L Armstrong, O Hughes, S Yung… - Human molecular …, 2006 - academic.oup.com
Understanding the molecular mechanism by which pluripotency is maintained in human
embryonic stem cells (hESC) is important for the development of improved methods to …

DNA methylation is required for the control of stem cell differentiation in the small intestine

KL Sheaffer, R Kim, R Aoki, EN Elliott… - Genes & …, 2014 - genesdev.cshlp.org
The mammalian intestinal epithelium has a unique organization in which crypts harboring
stem cells produce progenitors and finally clonal populations of differentiated cells …

Association of tissue-specific differentially methylated regions (TDMs) with differential gene expression

F Song, JF Smith, MT Kimura… - Proceedings of the …, 2005 - National Acad Sciences
Early studies proposed that DNA methylation could have a role in regulating gene
expression during development [Riggs, AD (1975) Cytogenet. Cell Genet. 14, 9–25] …

Dimethyl sulfoxide has an impact on epigenetic profile in mouse embryoid body

M Iwatani, K Ikegami, Y Kremenska, N Hattori… - Stem …, 2006 - academic.oup.com
Dimethyl sulfoxide (DMSO), an amphipathic molecule, is widely used not only as a solvent
for water‐insoluble substances but also as a cryopreservant for various types of cells …

Differences between human embryonic stem cell lines

C Allegrucci, LE Young - Human reproduction update, 2007 - academic.oup.com
The promise of human embryonic stem cell (hESC) lines for treating injuries and
degenerative diseases, for understanding early human development, for disease modelling …

The genomic impact of DNA CpG methylation on gene expression; relationships in prostate cancer

MD Long, DJ Smiraglia, MJ Campbell - Biomolecules, 2017 - mdpi.com
The process of DNA CpG methylation has been extensively investigated for over 50 years
and revealed associations between changing methylation status of CpG islands and gene …