Metatranscriptome analyses indicate resource partitioning between diatoms in the field

H Alexander, BD Jenkins… - Proceedings of the …, 2015 - National Acad Sciences
Diverse communities of marine phytoplankton carry out half of global primary production.
The vast diversity of the phytoplankton has long perplexed ecologists because these …

Phosphorus starvation and luxury uptake in green microalgae revisited

A Solovchenko, I Khozin-Goldberg, I Selyakh… - Algal Research, 2019 - Elsevier
Phosphorus (P) is central to storing and transferring energy and information in living cells,
including those of microalgae. Many microalgal species dwelling in low P environments are …

[HTML][HTML] Colony formation in Phaeocystis antarctica: connecting molecular mechanisms with iron biogeochemistry

SJ Bender, DM Moran, MR McIlvin, H Zheng… - …, 2018 - bg.copernicus.org
Phaeocystis antarctica is an important phytoplankter of the Ross Sea where it dominates the
early season bloom after sea ice retreat and is a major contributor to carbon export. The …

High-throughput identification of reference genes for research and clinical RT-qPCR analysis of breast cancer samples

DV Maltseva, NA Khaustova, NN Fedotov… - Journal of clinical …, 2013 - Springer
Background Quantification and normalization of RT-qPCR data critically depends on the
expression of so called reference genes. Our goal was to develop a strategy for the selection …

Pan-cancer analysis of TCGA data revealed promising reference genes for qPCR normalization

GS Krasnov, AV Kudryavtseva, AV Snezhkina… - Frontiers in …, 2019 - frontiersin.org
Quantitative PCR (qPCR) remains the most widely used technique for gene expression
evaluation. Obtaining reliable data using this method requires reference genes (RGs) with …

Genetic indicators of iron limitation in wild populations of Thalassiosira oceanica from the northeast Pacific Ocean

PD Chappell, LAP Whitney, JR Wallace… - The ISME …, 2015 - academic.oup.com
Assessing the iron (Fe) nutritional status of natural diatom populations has proven
challenging as physiological and molecular responses can differ in diatoms of the same …

De novo assembly of Aureococcus anophagefferens transcriptomes reveals diverse responses to the low nutrient and low light conditions present during blooms

KR Frischkorn, MJ Harke, CJ Gobler… - Frontiers in …, 2014 - frontiersin.org
Transcriptome profiling was performed on the harmful algal bloom-forming pelagophyte
Aureococcus anophagefferens strain CCMP 1850 to assess responses to common stressors …

Thalassiosira pseudonana (Cyclotella nana) (Hustedt) Hasle et Heimdal (Bacillariophyceae): A genetically tractable model organism for studying diatom biology …

N Poulsen, N Kröger - Journal of Phycology, 2023 - Wiley Online Library
In 2004, Thalassiosira pseudonana was the first eukaryotic marine alga to have its genome
sequenced. Since then, this species has quickly emerged as a valuable model species for …

Gene expression dynamics of natural assemblages of heterotrophic flagellates during bacterivory

A Obiol, D López-Escardó, ED Salomaki… - Microbiome, 2023 - Springer
Background Marine heterotrophic flagellates (HF) are dominant bacterivores in the ocean,
where they represent the trophic link between bacteria and higher trophic levels and …

Cobalamin-independent methionine synthase distribution and influence on vitamin B12 growth requirements in marine diatoms

KA Ellis, NR Cohen, C Moreno, A Marchetti - Protist, 2017 - Elsevier
The requirement for cobalamin (vitamin B 12) in microalgae is primarily a function of the type
of methionine synthase present within their gene repertoires. Our study validates this …