[HTML][HTML] Medicinal chemistry strategies towards the development of non-covalent SARS-CoV-2 Mpro inhibitors

L Song, S Gao, B Ye, M Yang, Y Cheng, D Kang… - … Pharmaceutica Sinica B, 2024 - Elsevier
The main protease (M pro) of SARS-CoV-2 is an attractive target in anti-COVID-19 therapy
for its high conservation and major role in the virus life cycle. The covalent M pro inhibitor …

Covalent narlaprevir-and boceprevir-derived hybrid inhibitors of SARS-CoV-2 main protease

DW Kneller, H Li, G Phillips, KL Weiss, Q Zhang… - Nature …, 2022 - nature.com
Emerging SARS-CoV-2 variants continue to threaten the effectiveness of COVID-19
vaccines, and small-molecule antivirals can provide an important therapeutic treatment …

Autoprocessing and oxyanion loop reorganization upon GC373 and nirmatrelvir binding of monomeric SARS-CoV-2 main protease catalytic domain

NT Nashed, DW Kneller, L Coates, R Ghirlando… - Communications …, 2022 - nature.com
The monomeric catalytic domain (residues 1–199) of SARS-CoV-2 main protease (MPro1-
199) fused to 25 amino acids of its flanking nsp4 region mediates its autoprocessing at the …

Recent Advances on Targeting Proteases for Antiviral Development

PHO Borges, SB Ferreira, FP Silva Jr - Viruses, 2024 - mdpi.com
Viral proteases are an important target for drug development, since they can modulate vital
pathways in viral replication, maturation, assembly and cell entry. With the (re) appearance …

Comprehensive fragment screening of the SARS‐CoV‐2 proteome explores novel chemical space for drug development

H Berg, MA Wirtz Martin, N Altincekic… - Angewandte Chemie …, 2022 - Wiley Online Library
Abstract SARS‐CoV‐2 (SCoV2) and its variants of concern pose serious challenges to the
public health. The variants increased challenges to vaccines, thus necessitating for …

Insights into the mechanism of SARS-CoV-2 main protease autocatalytic maturation from model precursors

A Aniana, NT Nashed, R Ghirlando, L Coates… - Communications …, 2023 - nature.com
A critical step for SARS-CoV-2 assembly and maturation involves the autoactivation of the
main protease (MProWT) from precursor polyproteins. Upon expression, a model precursor …

EvoAI enables extreme compression and reconstruction of the protein sequence space

Z Ma, W Li, Y Shen, Y Xu, G Liu, J Chang, Z Li, H Qin… - Nature …, 2024 - nature.com
Designing proteins with improved functions requires a deep understanding of how
sequence and function are related, a vast space that is hard to explore. The ability to …

Structural similarities between SARS-CoV2 3CLpro and other viral proteases suggest potential lead molecules for developing broad spectrum antivirals

K Bafna, CL Cioffi, RM Krug, GT Montelione - Frontiers in Chemistry, 2022 - frontiersin.org
Considering the significant impact of the recent COVID-19 outbreak, development of broad-
spectrum antivirals is a high priority goal to prevent future global pandemics. Antiviral …

Why is dimeric 3D domain swapping in antibody light chains missing from the solution? atomistic insights mechanisms

L Duan, K Hengphasatporn, T Sakai… - The Journal of …, 2024 - ACS Publications
Misfolding of antibody light chains can lead to systemic light chain amyloidosis, which is
associated with misfolding and aggregation. The antibody light chain may engage in 3D …

Unmasking the conformational stability and inhibitor binding to SARS-CoV-2 main protease active site mutants and miniprecursor

A Kovalevsky, L Coates, DW Kneller… - Journal of molecular …, 2022 - Elsevier
We recently demonstrated that inhibitor binding reorganizes the oxyanion loop of a
monomeric catalytic domain of SARS CoV-2 main protease (MPro) from an unwound (E) to a …