Transcriptional coupling of distant regulatory genes in living embryos
The prevailing view of metazoan gene regulation is that individual genes are independently
regulated by their own dedicated sets of transcriptional enhancers. Past studies have …
regulated by their own dedicated sets of transcriptional enhancers. Past studies have …
Enhancer loops appear stable during development and are associated with paused polymerase
Y Ghavi-Helm, FA Klein, T Pakozdi, L Ciglar… - Nature, 2014 - nature.com
Developmental enhancers initiate transcription and are fundamental to our understanding of
developmental networks, evolution and disease. Despite their importance, the properties …
developmental networks, evolution and disease. Despite their importance, the properties …
[HTML][HTML] Chromatin gene-gene loops support the cross-regulation of genes with related function
T Pollex, R Marco-Ferreres, L Ciglar, Y Ghavi-Helm… - Molecular Cell, 2024 - cell.com
Chromatin loops between gene pairs have been observed in diverse contexts in both flies
and vertebrates. Combining high-resolution Capture-C, DNA fluorescence in situ …
and vertebrates. Combining high-resolution Capture-C, DNA fluorescence in situ …
Head involution in Drosophila: Genetic and morphogenetic connections to dorsal closure
A VanHook, A Letsou - … dynamics: an official publication of the …, 2008 - Wiley Online Library
Dorsal closure and head involution are complex morphogenetic processes that occur nearly
simultaneously, midway through Drosophila embryonic development. While dorsal closure …
simultaneously, midway through Drosophila embryonic development. While dorsal closure …
Regulation of the BMP Signaling-Responsive Transcriptional Network in the Drosophila Embryo
L Deignan, MT Pinheiro, C Sutcliffe, A Saunders… - PLoS …, 2016 - journals.plos.org
The BMP signaling pathway has a conserved role in dorsal-ventral axis patterning during
embryonic development. In Drosophila, graded BMP signaling is transduced by the Mad …
embryonic development. In Drosophila, graded BMP signaling is transduced by the Mad …
RTP801/REDD1 regulates the timing of cortical neurogenesis and neuron migration
C Malagelada, MA López-Toledano… - Journal of …, 2011 - Soc Neuroscience
The generation, differentiation, and migration of newborn neurons are critical features of
normal brain development that are subject to both extracellular and intracellular regulation …
normal brain development that are subject to both extracellular and intracellular regulation …
High-resolution single-cell 3D-models of chromatin ensembles during Drosophila embryogenesis
Single-cell chromatin studies provide insights into how chromatin structure relates to
functions of individual cells. However, balancing high-resolution and genome wide …
functions of individual cells. However, balancing high-resolution and genome wide …
miR-222-3p is involved in neural tube closure by directly targeting Ddit4 in RA induced NTDs mouse model
Y Sun, J Zhang, Y Wang, L Wang, M Song, A Khan… - Cell Cycle, 2021 - Taylor & Francis
Previously our results showed miR-222-3p was significantly downregulated in retinoic acid-
induced neural tube defect (NTD) mouse model through transcriptome. Down-regulation of …
induced neural tube defect (NTD) mouse model through transcriptome. Down-regulation of …
Plasma membrane translocation of REDD1 governed by GPCRs contributes to mTORC1 activation
G Michel, HWD Matthes, M Hachet-Haas… - Journal of cell …, 2014 - journals.biologists.com
The mTORC1 kinase promotes cell growth in response to growth factors by activation of
receptor tyrosine kinase. It is regulated by the cellular energy level and the availability of …
receptor tyrosine kinase. It is regulated by the cellular energy level and the availability of …
Tsetse fly tolerance to T. brucei infection: transcriptome analysis of trypanosome-associated changes in the tsetse fly salivary gland
I Matetovici, G Caljon, J Van Den Abbeele - BMC genomics, 2016 - Springer
Abstract Background For their transmission, African trypanosomes rely on their blood
feeding insect vector, the tsetse fly (Glossina sp.). The ingested Trypanosoma brucei …
feeding insect vector, the tsetse fly (Glossina sp.). The ingested Trypanosoma brucei …