Nonlinear and stochastic dynamics in the heart

Z Qu, G Hu, A Garfinkel, JN Weiss - Physics reports, 2014 - Elsevier
In a normal human life span, the heart beats about 2–3 billion times. Under diseased
conditions, a heart may lose its normal rhythm and degenerate suddenly into much faster …

Calibration of ionic and cellular cardiac electrophysiology models

DG Whittaker, M Clerx, CL Lei… - … Systems Biology and …, 2020 - Wiley Online Library
Cardiac electrophysiology models are among the most mature and well‐studied
mathematical models of biological systems. This maturity is bringing new challenges as …

[HTML][HTML] Chaste: an open source C++ library for computational physiology and biology

GR Mirams, CJ Arthurs, MO Bernabeu… - PLoS computational …, 2013 - journals.plos.org
Chaste—C ancer, H eart A nd S oft T issue E nvironment—is an open source C++ library for
the computational simulation of mathematical models developed for physiology and biology …

[HTML][HTML] COMBINE archive and OMEX format: one file to share all information to reproduce a modeling project

FT Bergmann, R Adams, S Moodie, J Cooper… - BMC …, 2014 - Springer
Background With the ever increasing use of computational models in the biosciences, the
need to share models and reproduce the results of published studies efficiently and easily is …

Myokit: a simple interface to cardiac cellular electrophysiology

M Clerx, P Collins, E De Lange, PGA Volders - Progress in biophysics and …, 2016 - Elsevier
Myokit is a new powerful and versatile software tool for modeling and simulation of cardiac
cellular electrophysiology. Myokit consists of an easy-to-read modeling language, a …

Exploiting mathematical models to illuminate electrophysiological variability between individuals

AX Sarkar, DJ Christini, EA Sobie - The Journal of physiology, 2012 - Wiley Online Library
Across individuals within a population, several levels of variability are observed, from the
differential expression of ion channels at the molecular level, to the various action potential …

Application of cardiac electrophysiology simulations to pro‐arrhythmic safety testing

GR Mirams, MR Davies, Y Cui, P Kohl… - British journal of …, 2012 - Wiley Online Library
Concerns over cardiac side effects are the largest single cause of compound attrition during
pharmaceutical drug development. For a number of years, biophysically detailed …

[HTML][HTML] Validation and trustworthiness of multiscale models of cardiac electrophysiology

P Pathmanathan, RA Gray - Frontiers in Physiology, 2018 - frontiersin.org
Computational models of cardiac electrophysiology have a long history in basic science
applications and device design and evaluation, but have significant potential for clinical …

[HTML][HTML] Variability in high-throughput ion-channel screening data and consequences for cardiac safety assessment

RC Elkins, MR Davies, SJ Brough, DJ Gavaghan… - … of pharmacological and …, 2013 - Elsevier
Introduction Unwanted drug interactions with ionic currents in the heart can lead to an
increased pro-arrhythmic risk to patients in the clinic. It is therefore a priority for safety …

[HTML][HTML] Prediction of thorough QT study results using action potential simulations based on ion channel screens

GR Mirams, MR Davies, SJ Brough… - … of pharmacological and …, 2014 - Elsevier
Introduction Detection of drug-induced pro-arrhythmic risk is a primary concern for
pharmaceutical companies and regulators. Increased risk is linked to prolongation of the QT …