Best practice for wildlife gut microbiome research: A comprehensive review of methodology for 16S rRNA gene investigations

L Combrink, IR Humphreys, Q Washburn… - Frontiers in …, 2023 - frontiersin.org
Extensive research in well-studied animal models underscores the importance of
commensal gastrointestinal (gut) microbes to animal physiology. Gut microbes have been …

[HTML][HTML] Linking soil microbial community structure to potential carbon mineralization: A continental scale assessment of reduced tillage

EL Rieke, SB Cappellazzi, M Cope, D Liptzin… - Soil Biology and …, 2022 - Elsevier
Potential carbon mineralization (Cmin) is a commonly used indicator of soil health, with
greater Cmin values interpreted as healthier soil. While Cmin values are typically greater in …

Grapevine wood microbiome analysis identifies key fungal pathogens and potential interactions with the bacterial community implicated in grapevine trunk disease …

B Fotios, V Sotirios, P Elena, S Anastasios… - Environmental …, 2021 - Springer
Abstract Background Grapevine trunk diseases (GTDs) is a disease complex caused by
wood pathogenic fungi belonging to genera like Phaeomoniella, Phaeoacremonium …

Microbial linkages to soil biogeochemical processes in a poorly drained agricultural ecosystem

W Yu, NC Lawrence, T Sooksa-nguan, SD Smith… - Soil Biology and …, 2021 - Elsevier
Soil microorganisms mediate biogeochemical processes, but how microbial community
composition influences these processes remains contested. We combined monthly …

Interactive Effects of Scion and Rootstock Genotypes on the Root Microbiome of Grapevines (Vitis spp. L.)

SN Vink, F Dini-Andreote, R Höfle, A Kicherer… - Applied Sciences, 2021 - mdpi.com
Diversity and community structure of soil microorganisms are increasingly recognized as
important contributors to sustainable agriculture and plant health. In viticulture, grapevine …

The response of soil and phyllosphere microbial communities to repeated application of the fungicide iprodione: accelerated biodegradation or toxicity?

A Katsoula, S Vasileiadis, M Sapountzi… - FEMS microbiology …, 2020 - academic.oup.com
Pesticides interact with microorganisms in various ways with the outcome being negative or
positive for the soil microbiota. Pesticides' effects on soil microorganisms have been studied …

Interactions of anthelmintic veterinary drugs with the soil microbiota: Toxicity or enhanced biodegradation?

S Lagos, G Tsetsekos, S Mastrogianopoulos… - Environmental …, 2023 - Elsevier
Anthelmintic (AH) compounds are used to control gastrointestinal nematodes (GINs) in
livestock production. They are only partially metabolized in animals ending in animal excreta …

Macroalgal microbiome biogeography is shaped by environmental drivers rather than geographical distance

WS Pearman, GA Duffy, XP Liu, NJ Gemmell… - Annals of …, 2024 - academic.oup.com
Abstract Background and Aims Contrasting patterns of host and microbiome biogeography
can provide insight into the drivers of microbial community assembly. Distance–decay …

Drivers of plankton community structure in intermittent and continuous coastal upwelling systems–from microbes and microscale in-situ imaging to large scale …

MS Schmid, S Sponaugle, AW Thompson… - Frontiers in Marine …, 2023 - frontiersin.org
Eastern Boundary Systems support major fisheries whose early life stages depend on
upwelling production. Upwelling can be highly variable at the regional scale, with …

Water availability alters the community structure of arbuscular mycorrhizal fungi and determines plant mycorrhizal benefit

A Frew - Plants, People, Planet, 2023 - Wiley Online Library
Societal Impact Statement The world faces major changes in rainfall patterns and water
availability, posing a significant threat to plant productions systems and food security. The …