The transcriptional foundation of pluripotency

I Chambers, SR Tomlinson - 2009 - journals.biologists.com
A fundamental goal in biology is to understand the molecular basis of cell identity.
Pluripotent embryonic stem (ES) cell identity is governed by a set of transcription factors …

The transcription factors Blimp-1 and IRF4 jointly control the differentiation and function of effector regulatory T cells

E Cretney, A Xin, W Shi, M Minnich, F Masson… - Nature …, 2011 - nature.com
Regulatory T cells (Treg cells) are required for peripheral tolerance. Evidence indicates that
Treg cells can adopt specialized differentiation programs in the periphery that are controlled …

Novel Foxo1-dependent transcriptional programs control Treg cell function

W Ouyang, W Liao, CT Luo, N Yin, M Huse, MV Kim… - Nature, 2012 - nature.com
Regulatory T (Treg) cells, characterized by expression of the transcription factor forkhead
box P3 (Foxp3), maintain immune homeostasis by suppressing self-destructive immune …

High-throughput methods for the analysis of transcription factors and chromatin modifications: Low input, single cell and spatial genomic technologies

M Salma, C Andrieu-Soler, V Deleuze… - Blood Cells, Molecules …, 2023 - Elsevier
Genome-wide analysis of transcription factors and epigenomic features is instrumental to
shed light on DNA-templated regulatory processes such as transcription, cellular …

PRC2 directly methylates GATA4 and represses its transcriptional activity

A He, X Shen, Q Ma, J Cao, A von Gise… - Genes & …, 2012 - genesdev.cshlp.org
Polycomb-repressive complex 2 (PRC2) promotes tissue-specific differentiation by
depositing trimethylated histone H3 Lys 27 (H3K27me3) epigenetic marks to silence ectopic …

Bicaudal D2, dynein, and kinesin-1 associate with nuclear pore complexes and regulate centrosome and nuclear positioning during mitotic entry

D Splinter, ME Tanenbaum, A Lindqvist, D Jaarsma… - PLoS …, 2010 - journals.plos.org
BICD2 is one of the two mammalian homologues of the Drosophila Bicaudal D, an
evolutionarily conserved adaptor between microtubule motors and their cargo that was …

MAP7 family proteins regulate kinesin-1 recruitment and activation

PJ Hooikaas, M Martin, T Mühlethaler… - Journal of Cell …, 2019 - rupress.org
Kinesin-1 is responsible for microtubule-based transport of numerous cellular cargoes.
Here, we explored the regulation of kinesin-1 by MAP7 proteins. We found that all four …

Stage-specific control of early B cell development by the transcription factor Ikaros

TA Schwickert, H Tagoh, S Gültekin, A Dakic… - Nature …, 2014 - nature.com
The transcription factor Ikaros is an essential regulator of lymphopoiesis. Here we studied its
B cell–specific function by conditional inactivation of the gene encoding Ikaros (Ikzf1) in pro …

An integrated epigenomic and transcriptomic map of mouse and human αβ T cell development

LB Chopp, V Gopalan, T Ciucci, A Ruchinskas, Z Rae… - Immunity, 2020 - cell.com
Summary αβ lineage T cells, most of which are CD4+ or CD8+ and recognize MHC I-or MHC
II-presented antigens, are essential for immune responses and develop from CD4+ CD8+ …

Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease

A He, F Gu, Y Hu, Q Ma, L Yi Ye, JA Akiyama… - Nature …, 2014 - nature.com
How stage-specific enhancer dynamics modulate gene expression patterns essential for
organ development, homeostasis and disease is not well understood. Here, we addressed …