An extensive review of tools for manual annotation of documents

M Neves, J Ševa - Briefings in bioinformatics, 2021 - academic.oup.com
Motivation Annotation tools are applied to build training and test corpora, which are
essential for the development and evaluation of new natural language processing …

A survey on annotation tools for the biomedical literature

M Neves, U Leser - Briefings in bioinformatics, 2014 - academic.oup.com
New approaches to biomedical text mining crucially depend on the existence of
comprehensive annotated corpora. Such corpora, commonly called gold standards, are …

[PDF][PDF] Text Mining for Bioinformatics Using Biomedical Literature.

A Lamurias, FM Couto - 2019 - core.ac.uk
Biomedical literature has become a rich source of information for various applications.
Automatic text mining methods can make the processing of extracting information from a …

Development and application of a keyword-based knowledge map for effective R&D planning

B Yoon, S Lee, G Lee - Scientometrics, 2010 - akjournals.com
With the growing recognition of the importance of knowledge creation, knowledge maps are
being regarded as a critical tool for successful knowledge management. However, the …

AIBench: a rapid application development framework for translational research in biomedicine

D Glez-Peña, M Reboiro-Jato, P Maia, M Rocha… - Computer methods and …, 2010 - Elsevier
Applied research in both biomedical discovery and translational medicine today often
requires the rapid development of fully featured applications containing both advanced and …

BioAnnote: A software platform for annotating biomedical documents with application in medical learning environments

H López-Fernández, M Reboiro-Jato… - Computer methods and …, 2013 - Elsevier
Automatic term annotation from biomedical documents and external information linking are
becoming a necessary prerequisite in modern computer-aided medical learning systems. In …

Utilizing horizontal and vertical parallelism with a no-instruction-set compiler for custom datapaths

M Reshadi, B Gorjiara, D Gajski - … International Conference on …, 2005 - ieeexplore.ieee.org
Performance of programs can be improved by utilizing their horizontal and vertical
parallelism. In some processors (VLIW based), compiler can utilize horizontal parallelism by …

Heracles: A framework for developing and evaluating text mining algorithms

K Schouten, F Frasincar, R Dekker… - Expert Systems with …, 2019 - Elsevier
Many of today's businesses are driven by data, and while traditionally only quantitative data
is considered, the role of textual data in our digital world is rapidly increasing. Text mining …

BioDR: Semantic indexing networks for biomedical document retrieval

A Lourenço, R Carreira, D Glez-Peña… - Expert Systems with …, 2010 - Elsevier
In Biomedical research, retrieving documents that match an interesting query is a task
performed quite frequently. Typically, the set of obtained results is extensive containing …

Preliminary evaluation of the CellFinder literature curation pipeline for gene expression in kidney cells and anatomical parts

M Neves, A Damaschun, N Mah, F Lekschas… - Database, 2013 - academic.oup.com
Biomedical literature curation is the process of automatically and/or manually deriving
knowledge from scientific publications and recording it into specialized databases for …