The prospects of quantum computing in computational molecular biology

C Outeiral, M Strahm, J Shi, GM Morris… - Wiley …, 2021 - Wiley Online Library
Quantum computers can in principle solve certain problems exponentially more quickly than
their classical counterparts. We have not yet reached the advent of useful quantum …

The protein folding problem

KA Dill, SB Ozkan, MS Shell, TR Weikl - Annu. Rev. Biophys., 2008 - annualreviews.org
The “protein folding problem” consists of three closely related puzzles:(a) What is the folding
code?(b) What is the folding mechanism?(c) Can we predict the native structure of a protein …

A multi-analytical approach to peer-to-peer mobile payment acceptance prediction

Z Kalinic, V Marinkovic, S Molinillo… - Journal of Retailing and …, 2019 - Elsevier
This research is a pioneering study into peer-to-peer mobile payment (P2PM-pay) systems'
adoption. It proposes a behavioral model of the use of P2PM-pay systems and identifies the …

[HTML][HTML] Finding low-energy conformations of lattice protein models by quantum annealing

A Perdomo-Ortiz, N Dickson, M Drew-Brook, G Rose… - Scientific reports, 2012 - nature.com
Lattice protein folding models are a cornerstone of computational biophysics. Although
these models are a coarse grained representation, they provide useful insight into the …

Principles and overview of sampling methods for modeling macromolecular structure and dynamics

T Maximova, R Moffatt, B Ma, R Nussinov… - PLoS computational …, 2016 - journals.plos.org
Investigation of macromolecular structure and dynamics is fundamental to understanding
how macromolecules carry out their functions in the cell. Significant advances have been …

Three-dimensional protein structure prediction: Methods and computational strategies

M Dorn, MB e Silva, LS Buriol, LC Lamb - Computational biology and …, 2014 - Elsevier
A long standing problem in structural bioinformatics is to determine the three-dimensional (3-
D) structure of a protein when only a sequence of amino acid residues is given. Many …

[PDF][PDF] Protein folding in the hydrophobic-hydrophilic (HP) is NP-complete

B Berger, T Leighton - Proceedings of the second annual international …, 1998 - dl.acm.org
One of the simplest and most popular biophysical models of protein folding is the
hydrophobic-hydrophilic(HP) model. The HP model abstracts the hydrophobic interaction in …

Simulating chemistry using quantum computers

I Kassal, JD Whitfield, A Perdomo-Ortiz… - Annual review of …, 2011 - annualreviews.org
The difficulty of simulating quantum systems, well known to quantum chemists, prompted the
idea of quantum computation. One can avoid the steep scaling associated with the exact …

[HTML][HTML] Quantum computing for chemical and biomolecular product design

MP Andersson, MN Jones, KV Mikkelsen, F You… - Current Opinion in …, 2022 - Elsevier
Highlights•Quantum computing and its use for computer-aided product design is discussed
and perspectives for several types of problems are provided.•Hybrid QC methods are likely …

Realizing the potential of blockchain technologies in genomics

HI Ozercan, AM Ileri, E Ayday, C Alkan - Genome research, 2018 - genome.cshlp.org
Genomics data introduce a substantial computational burden as well as data privacy and
ownership issues. Data sets generated by high-throughput sequencing platforms require …